Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLDN4O14493 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.17■■□□□ 1.78
CLDN4O14493 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLDN4O14493 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CLDN4O14493 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.12■■□□□ 1.77
CLDN4O14493 RARRES2P7-201ENST00000567349 469 ntBASIC26.11■■□□□ 1.77
CLDN4O14493 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.11■■□□□ 1.77
CLDN4O14493 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
CLDN4O14493 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CLDN4O14493 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLDN4O14493 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.07■■□□□ 1.76
CLDN4O14493 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.07■■□□□ 1.76
CLDN4O14493 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC26.07■■□□□ 1.76
CLDN4O14493 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLDN4O14493 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CLDN4O14493 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLDN4O14493 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.04■■□□□ 1.76
CLDN4O14493 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLDN4O14493 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CLDN4O14493 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CLDN4O14493 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CLDN4O14493 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.01■■□□□ 1.75
CLDN4O14493 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26■■□□□ 1.75
CLDN4O14493 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC25.99■■□□□ 1.75
CLDN4O14493 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
CLDN4O14493 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.99■■□□□ 1.75
CLDN4O14493 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CLDN4O14493 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
CLDN4O14493 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CLDN4O14493 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
CLDN4O14493 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
CLDN4O14493 SETD8P1-201ENST00000623146 1180 ntBASIC25.94■■□□□ 1.74
CLDN4O14493 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
CLDN4O14493 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CLDN4O14493 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.93■■□□□ 1.74
CLDN4O14493 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CLDN4O14493 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLDN4O14493 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.92■■□□□ 1.74
CLDN4O14493 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
CLDN4O14493 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CLDN4O14493 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CLDN4O14493 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CLDN4O14493 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
CLDN4O14493 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CLDN4O14493 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CLDN4O14493 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CLDN4O14493 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CLDN4O14493 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CLDN4O14493 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC25.86■■□□□ 1.73
CLDN4O14493 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CLDN4O14493 AL133380.1-201ENST00000506013 324 ntBASIC25.82■■□□□ 1.72
CLDN4O14493 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CLDN4O14493 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLDN4O14493 AC097358.2-201ENST00000607541 1159 ntBASIC25.8■■□□□ 1.72
CLDN4O14493 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CLDN4O14493 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.79■■□□□ 1.72
CLDN4O14493 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
CLDN4O14493 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
CLDN4O14493 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CLDN4O14493 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
CLDN4O14493 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
CLDN4O14493 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.76■■□□□ 1.72
CLDN4O14493 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CLDN4O14493 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CLDN4O14493 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC25.73■■□□□ 1.71
CLDN4O14493 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CLDN4O14493 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
CLDN4O14493 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.72■■□□□ 1.71
CLDN4O14493 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC25.72■■□□□ 1.71
CLDN4O14493 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.71■■□□□ 1.71
CLDN4O14493 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CLDN4O14493 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CLDN4O14493 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
CLDN4O14493 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CLDN4O14493 AC136428.2-201ENST00000563187 214 ntBASIC25.7■■□□□ 1.7
CLDN4O14493 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CLDN4O14493 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC25.69■■□□□ 1.7
CLDN4O14493 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CLDN4O14493 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CLDN4O14493 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CLDN4O14493 AC120057.4-201ENST00000624722 1615 ntBASIC25.67■■□□□ 1.7
CLDN4O14493 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.66■■□□□ 1.7
CLDN4O14493 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
CLDN4O14493 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.7
CLDN4O14493 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CLDN4O14493 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.63■■□□□ 1.69
CLDN4O14493 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.63■■□□□ 1.69
CLDN4O14493 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CLDN4O14493 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
CLDN4O14493 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CLDN4O14493 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.61■■□□□ 1.69
CLDN4O14493 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CLDN4O14493 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CLDN4O14493 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.59■■□□□ 1.69
CLDN4O14493 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
CLDN4O14493 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.58■■□□□ 1.69
CLDN4O14493 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.58■■□□□ 1.68
CLDN4O14493 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CLDN4O14493 WASH5P-204ENST00000632292 975 ntBASIC25.57■■□□□ 1.68
CLDN4O14493 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms