Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv3-5A0A140T8M6 Zfp131-207ENSMUST00000224946 1783 ntBASIC16.38■□□□□ 0.21
Igkv3-5A0A140T8M6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv3-5A0A140T8M6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC16.36■□□□□ 0.21
Igkv3-5A0A140T8M6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Igkv3-5A0A140T8M6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Igkv3-5A0A140T8M6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv3-5A0A140T8M6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv3-5A0A140T8M6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv3-5A0A140T8M6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Igkv3-5A0A140T8M6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv3-5A0A140T8M6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv3-5A0A140T8M6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Igkv3-5A0A140T8M6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv3-5A0A140T8M6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv3-5A0A140T8M6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Igkv3-5A0A140T8M6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC16.27■□□□□ 0.19
Igkv3-5A0A140T8M6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Igkv3-5A0A140T8M6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igkv3-5A0A140T8M6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igkv3-5A0A140T8M6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Igkv3-5A0A140T8M6 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igkv3-5A0A140T8M6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igkv3-5A0A140T8M6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igkv3-5A0A140T8M6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv3-5A0A140T8M6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv3-5A0A140T8M6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Igkv3-5A0A140T8M6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv3-5A0A140T8M6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv3-5A0A140T8M6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv3-5A0A140T8M6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv3-5A0A140T8M6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv3-5A0A140T8M6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv3-5A0A140T8M6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC16.17■□□□□ 0.18
Igkv3-5A0A140T8M6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv3-5A0A140T8M6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv3-5A0A140T8M6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv3-5A0A140T8M6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv3-5A0A140T8M6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv3-5A0A140T8M6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv3-5A0A140T8M6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv3-5A0A140T8M6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv3-5A0A140T8M6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv3-5A0A140T8M6 Gm25262-201ENSMUST00000174934 133 ntBASIC16.11■□□□□ 0.17
Igkv3-5A0A140T8M6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv3-5A0A140T8M6 Gm2415-204ENSMUST00000190235 2004 ntBASIC16.11■□□□□ 0.17
Igkv3-5A0A140T8M6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Igkv3-5A0A140T8M6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Igkv3-5A0A140T8M6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv3-5A0A140T8M6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv3-5A0A140T8M6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv3-5A0A140T8M6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv3-5A0A140T8M6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Igkv3-5A0A140T8M6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv3-5A0A140T8M6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Igkv3-5A0A140T8M6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv3-5A0A140T8M6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.05■□□□□ 0.16
Igkv3-5A0A140T8M6 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.05■□□□□ 0.16
Igkv3-5A0A140T8M6 Gm6658-202ENSMUST00000209493 1885 ntBASIC16.04■□□□□ 0.16
Igkv3-5A0A140T8M6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv3-5A0A140T8M6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv3-5A0A140T8M6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv3-5A0A140T8M6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Igkv3-5A0A140T8M6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv3-5A0A140T8M6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
Igkv3-5A0A140T8M6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv3-5A0A140T8M6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv3-5A0A140T8M6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC16.01■□□□□ 0.15
Igkv3-5A0A140T8M6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Igkv3-5A0A140T8M6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv3-5A0A140T8M6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv3-5A0A140T8M6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv3-5A0A140T8M6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv3-5A0A140T8M6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv3-5A0A140T8M6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Igkv3-5A0A140T8M6 Mipep-204ENSMUST00000225043 1548 ntBASIC15.99■□□□□ 0.15
Igkv3-5A0A140T8M6 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv3-5A0A140T8M6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv3-5A0A140T8M6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv3-5A0A140T8M6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Igkv3-5A0A140T8M6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Igkv3-5A0A140T8M6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Igkv3-5A0A140T8M6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Igkv3-5A0A140T8M6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv3-5A0A140T8M6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv3-5A0A140T8M6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC15.91■□□□□ 0.14
Igkv3-5A0A140T8M6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Igkv3-5A0A140T8M6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Igkv3-5A0A140T8M6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv3-5A0A140T8M6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC15.88■□□□□ 0.13
Igkv3-5A0A140T8M6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv3-5A0A140T8M6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv3-5A0A140T8M6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv3-5A0A140T8M6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Igkv3-5A0A140T8M6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC15.87■□□□□ 0.13
Igkv3-5A0A140T8M6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Igkv3-5A0A140T8M6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
Igkv3-5A0A140T8M6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv3-5A0A140T8M6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv3-5A0A140T8M6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms