Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav16A0A075B653 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trav16A0A075B653 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav16A0A075B653 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav16A0A075B653 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.84■□□□□ 0.77
Trav16A0A075B653 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.83■□□□□ 0.77
Trav16A0A075B653 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trav16A0A075B653 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav16A0A075B653 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav16A0A075B653 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav16A0A075B653 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav16A0A075B653 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav16A0A075B653 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav16A0A075B653 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav16A0A075B653 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav16A0A075B653 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav16A0A075B653 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Trav16A0A075B653 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav16A0A075B653 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.76■□□□□ 0.75
Trav16A0A075B653 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav16A0A075B653 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav16A0A075B653 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.74■□□□□ 0.75
Trav16A0A075B653 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav16A0A075B653 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.72■□□□□ 0.75
Trav16A0A075B653 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav16A0A075B653 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trav16A0A075B653 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trav16A0A075B653 Rab21-202ENSMUST00000218831 843 ntBASIC19.69■□□□□ 0.74
Trav16A0A075B653 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav16A0A075B653 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trav16A0A075B653 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trav16A0A075B653 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.65■□□□□ 0.74
Trav16A0A075B653 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav16A0A075B653 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav16A0A075B653 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.74
Trav16A0A075B653 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Trav16A0A075B653 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav16A0A075B653 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav16A0A075B653 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trav16A0A075B653 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trav16A0A075B653 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trav16A0A075B653 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav16A0A075B653 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trav16A0A075B653 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav16A0A075B653 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trav16A0A075B653 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trav16A0A075B653 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trav16A0A075B653 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trav16A0A075B653 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.56■□□□□ 0.72
Trav16A0A075B653 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trav16A0A075B653 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav16A0A075B653 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav16A0A075B653 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav16A0A075B653 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Trav16A0A075B653 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trav16A0A075B653 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trav16A0A075B653 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trav16A0A075B653 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
Trav16A0A075B653 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav16A0A075B653 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trav16A0A075B653 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trav16A0A075B653 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.52■□□□□ 0.72
Trav16A0A075B653 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trav16A0A075B653 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav16A0A075B653 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav16A0A075B653 Mipep-204ENSMUST00000225043 1548 ntBASIC19.51■□□□□ 0.71
Trav16A0A075B653 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav16A0A075B653 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trav16A0A075B653 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trav16A0A075B653 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav16A0A075B653 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trav16A0A075B653 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trav16A0A075B653 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trav16A0A075B653 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Trav16A0A075B653 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav16A0A075B653 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trav16A0A075B653 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav16A0A075B653 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav16A0A075B653 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav16A0A075B653 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav16A0A075B653 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trav16A0A075B653 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav16A0A075B653 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.45■□□□□ 0.7
Trav16A0A075B653 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.45■□□□□ 0.7
Trav16A0A075B653 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav16A0A075B653 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav16A0A075B653 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav16A0A075B653 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.42■□□□□ 0.7
Trav16A0A075B653 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav16A0A075B653 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav16A0A075B653 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav16A0A075B653 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav16A0A075B653 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav16A0A075B653 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav16A0A075B653 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trav16A0A075B653 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trav16A0A075B653 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav16A0A075B653 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav16A0A075B653 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav16A0A075B653 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms