Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Gm5538W4VSP6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm5538W4VSP6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Gm5538W4VSP6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm5538W4VSP6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm5538W4VSP6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm5538W4VSP6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Gm5538W4VSP6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm5538W4VSP6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm5538W4VSP6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gm5538W4VSP6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm5538W4VSP6 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.58■□□□□ 0.88
Gm5538W4VSP6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm5538W4VSP6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Golgb1-201ENSMUST00000023534 498 ntBASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm5538W4VSP6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm5538W4VSP6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.54■□□□□ 0.88
Gm5538W4VSP6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5538W4VSP6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5538W4VSP6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.54■□□□□ 0.88
Gm5538W4VSP6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5538W4VSP6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5538W4VSP6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm5538W4VSP6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm5538W4VSP6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.52■□□□□ 0.88
Gm5538W4VSP6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Gm5538W4VSP6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Gm5538W4VSP6 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm5538W4VSP6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.52■□□□□ 0.88
Gm5538W4VSP6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Gm5538W4VSP6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm5538W4VSP6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5538W4VSP6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5538W4VSP6 Gm12922-201ENSMUST00000120626 809 ntBASIC20.51■□□□□ 0.87
Gm5538W4VSP6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5538W4VSP6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5538W4VSP6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm5538W4VSP6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm5538W4VSP6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms