Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CSNK1G3Q9Y6M4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CSNK1G3Q9Y6M4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CSNK1G3Q9Y6M4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CSNK1G3Q9Y6M4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CSNK1G3Q9Y6M4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CSNK1G3Q9Y6M4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.04■■□□□ 1.12
CSNK1G3Q9Y6M4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
CSNK1G3Q9Y6M4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.03■■□□□ 1.12
CSNK1G3Q9Y6M4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.03■■□□□ 1.12
CSNK1G3Q9Y6M4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.03■■□□□ 1.12
CSNK1G3Q9Y6M4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CSNK1G3Q9Y6M4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CSNK1G3Q9Y6M4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CSNK1G3Q9Y6M4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CSNK1G3Q9Y6M4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
CSNK1G3Q9Y6M4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSNK1G3Q9Y6M4 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.02■■□□□ 1.12
CSNK1G3Q9Y6M4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CSNK1G3Q9Y6M4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.02■■□□□ 1.12
CSNK1G3Q9Y6M4 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CSNK1G3Q9Y6M4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CSNK1G3Q9Y6M4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CSNK1G3Q9Y6M4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CSNK1G3Q9Y6M4 AC022211.4-201ENST00000625094 2161 ntBASIC22.01■■□□□ 1.11
CSNK1G3Q9Y6M4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.01■■□□□ 1.11
CSNK1G3Q9Y6M4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.01■■□□□ 1.11
CSNK1G3Q9Y6M4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.01■■□□□ 1.11
CSNK1G3Q9Y6M4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.01■■□□□ 1.11
CSNK1G3Q9Y6M4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.01■■□□□ 1.11
CSNK1G3Q9Y6M4 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.01■■□□□ 1.11
CSNK1G3Q9Y6M4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CSNK1G3Q9Y6M4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CSNK1G3Q9Y6M4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CSNK1G3Q9Y6M4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CSNK1G3Q9Y6M4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.01■■□□□ 1.11
CSNK1G3Q9Y6M4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22■■□□□ 1.11
CSNK1G3Q9Y6M4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22■■□□□ 1.11
CSNK1G3Q9Y6M4 AC087623.3-201ENST00000607047 1098 ntBASIC22■■□□□ 1.11
CSNK1G3Q9Y6M4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22■■□□□ 1.11
CSNK1G3Q9Y6M4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
CSNK1G3Q9Y6M4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CSNK1G3Q9Y6M4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22■■□□□ 1.11
CSNK1G3Q9Y6M4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.99■■□□□ 1.11
CSNK1G3Q9Y6M4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSNK1G3Q9Y6M4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CSNK1G3Q9Y6M4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.99■■□□□ 1.11
CSNK1G3Q9Y6M4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
CSNK1G3Q9Y6M4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CSNK1G3Q9Y6M4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CSNK1G3Q9Y6M4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.98■■□□□ 1.11
CSNK1G3Q9Y6M4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSNK1G3Q9Y6M4 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.98■■□□□ 1.11
CSNK1G3Q9Y6M4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSNK1G3Q9Y6M4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CSNK1G3Q9Y6M4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CSNK1G3Q9Y6M4 AC126544.1-201ENST00000580842 1059 ntBASIC21.98■■□□□ 1.11
CSNK1G3Q9Y6M4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CSNK1G3Q9Y6M4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CSNK1G3Q9Y6M4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.98■■□□□ 1.11
CSNK1G3Q9Y6M4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CSNK1G3Q9Y6M4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CSNK1G3Q9Y6M4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CSNK1G3Q9Y6M4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.97■■□□□ 1.11
CSNK1G3Q9Y6M4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSNK1G3Q9Y6M4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CSNK1G3Q9Y6M4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CSNK1G3Q9Y6M4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSNK1G3Q9Y6M4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSNK1G3Q9Y6M4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.97■■□□□ 1.11
CSNK1G3Q9Y6M4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSNK1G3Q9Y6M4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CSNK1G3Q9Y6M4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSNK1G3Q9Y6M4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSNK1G3Q9Y6M4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.96■■□□□ 1.11
CSNK1G3Q9Y6M4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.96■■□□□ 1.11
CSNK1G3Q9Y6M4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.96■■□□□ 1.11
CSNK1G3Q9Y6M4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSNK1G3Q9Y6M4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.96■■□□□ 1.11
CSNK1G3Q9Y6M4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CSNK1G3Q9Y6M4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CSNK1G3Q9Y6M4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
CSNK1G3Q9Y6M4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CSNK1G3Q9Y6M4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms