Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRCC1Q9NPI7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KRCC1Q9NPI7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
KRCC1Q9NPI7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.59■□□□□ 0.89
KRCC1Q9NPI7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.58■□□□□ 0.89
KRCC1Q9NPI7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.58■□□□□ 0.89
KRCC1Q9NPI7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRCC1Q9NPI7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KRCC1Q9NPI7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
KRCC1Q9NPI7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KRCC1Q9NPI7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KRCC1Q9NPI7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRCC1Q9NPI7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.58■□□□□ 0.89
KRCC1Q9NPI7 DUX4L18-201ENST00000553347 1267 ntBASIC20.58■□□□□ 0.89
KRCC1Q9NPI7 THA1P-201ENST00000590384 1145 ntBASIC20.58■□□□□ 0.89
KRCC1Q9NPI7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
KRCC1Q9NPI7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KRCC1Q9NPI7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KRCC1Q9NPI7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KRCC1Q9NPI7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
KRCC1Q9NPI7 AC120024.1-201ENST00000562672 995 ntBASIC20.57■□□□□ 0.88
KRCC1Q9NPI7 NTF6A-201ENST00000591175 560 ntBASIC20.57■□□□□ 0.88
KRCC1Q9NPI7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRCC1Q9NPI7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.57■□□□□ 0.88
KRCC1Q9NPI7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
KRCC1Q9NPI7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KRCC1Q9NPI7 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.57■□□□□ 0.88
KRCC1Q9NPI7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
KRCC1Q9NPI7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRCC1Q9NPI7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRCC1Q9NPI7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRCC1Q9NPI7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KRCC1Q9NPI7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.56■□□□□ 0.88
KRCC1Q9NPI7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.56■□□□□ 0.88
KRCC1Q9NPI7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
KRCC1Q9NPI7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KRCC1Q9NPI7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRCC1Q9NPI7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRCC1Q9NPI7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRCC1Q9NPI7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRCC1Q9NPI7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRCC1Q9NPI7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.55■□□□□ 0.88
KRCC1Q9NPI7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.55■□□□□ 0.88
KRCC1Q9NPI7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
KRCC1Q9NPI7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRCC1Q9NPI7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRCC1Q9NPI7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KRCC1Q9NPI7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
KRCC1Q9NPI7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KRCC1Q9NPI7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
KRCC1Q9NPI7 KRT18P24-201ENST00000344739 1156 ntBASIC20.54■□□□□ 0.88
KRCC1Q9NPI7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
KRCC1Q9NPI7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
KRCC1Q9NPI7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.54■□□□□ 0.88
KRCC1Q9NPI7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.54■□□□□ 0.88
KRCC1Q9NPI7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 C1orf229-201ENST00000623686 2258 ntBASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.53■□□□□ 0.88
KRCC1Q9NPI7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
KRCC1Q9NPI7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRCC1Q9NPI7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRCC1Q9NPI7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.52■□□□□ 0.88
KRCC1Q9NPI7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
KRCC1Q9NPI7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
KRCC1Q9NPI7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
KRCC1Q9NPI7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
KRCC1Q9NPI7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
KRCC1Q9NPI7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRCC1Q9NPI7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
KRCC1Q9NPI7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
KRCC1Q9NPI7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.51■□□□□ 0.87
KRCC1Q9NPI7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRCC1Q9NPI7 MIR4281-201ENST00000580852 62 ntBASIC20.51■□□□□ 0.87
KRCC1Q9NPI7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
KRCC1Q9NPI7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.51■□□□□ 0.87
KRCC1Q9NPI7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRCC1Q9NPI7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
KRCC1Q9NPI7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRCC1Q9NPI7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
KRCC1Q9NPI7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms