Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 SERBP1P1-201ENST00000396021 1160 ntBASIC23.67■■□□□ 1.38
CSNK1G1Q9HCP0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CSNK1G1Q9HCP0 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.67■■□□□ 1.38
CSNK1G1Q9HCP0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CSNK1G1Q9HCP0 AL138724.1-201ENST00000606771 1088 ntBASIC23.67■■□□□ 1.38
CSNK1G1Q9HCP0 AC009086.3-201ENST00000623486 1008 ntBASIC23.67■■□□□ 1.38
CSNK1G1Q9HCP0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.67■■□□□ 1.38
CSNK1G1Q9HCP0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSNK1G1Q9HCP0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.67■■□□□ 1.38
CSNK1G1Q9HCP0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.67■■□□□ 1.38
CSNK1G1Q9HCP0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSNK1G1Q9HCP0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSNK1G1Q9HCP0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSNK1G1Q9HCP0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSNK1G1Q9HCP0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.66■■□□□ 1.38
CSNK1G1Q9HCP0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.66■■□□□ 1.38
CSNK1G1Q9HCP0 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.66■■□□□ 1.38
CSNK1G1Q9HCP0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CSNK1G1Q9HCP0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.66■■□□□ 1.38
CSNK1G1Q9HCP0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 AC135279.3-201ENST00000610945 1311 ntBASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 PBX2P1-201ENST00000493219 1291 ntBASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 AC024257.2-201ENST00000549699 147 ntBASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 DUX4L4-201ENST00000566884 1269 ntBASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CSNK1G1Q9HCP0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CSNK1G1Q9HCP0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.64■■□□□ 1.38
CSNK1G1Q9HCP0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
CSNK1G1Q9HCP0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CSNK1G1Q9HCP0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CSNK1G1Q9HCP0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CSNK1G1Q9HCP0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CSNK1G1Q9HCP0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.64■■□□□ 1.37
CSNK1G1Q9HCP0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.64■■□□□ 1.37
CSNK1G1Q9HCP0 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CSNK1G1Q9HCP0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CSNK1G1Q9HCP0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CSNK1G1Q9HCP0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CSNK1G1Q9HCP0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CSNK1G1Q9HCP0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
CSNK1G1Q9HCP0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CSNK1G1Q9HCP0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.63■■□□□ 1.37
CSNK1G1Q9HCP0 MIR3181-201ENST00000578512 73 ntBASIC23.63■■□□□ 1.37
CSNK1G1Q9HCP0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.63■■□□□ 1.37
CSNK1G1Q9HCP0 AC011298.3-201ENST00000615796 283 ntBASIC23.63■■□□□ 1.37
CSNK1G1Q9HCP0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CSNK1G1Q9HCP0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.63■■□□□ 1.37
CSNK1G1Q9HCP0 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.63■■□□□ 1.37
CSNK1G1Q9HCP0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CSNK1G1Q9HCP0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSNK1G1Q9HCP0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CSNK1G1Q9HCP0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
CSNK1G1Q9HCP0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSNK1G1Q9HCP0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSNK1G1Q9HCP0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CSNK1G1Q9HCP0 AC079630.1-202ENST00000618127 1840 ntBASIC23.62■■□□□ 1.37
CSNK1G1Q9HCP0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSNK1G1Q9HCP0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.62■■□□□ 1.37
CSNK1G1Q9HCP0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CSNK1G1Q9HCP0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
CSNK1G1Q9HCP0 LINC01529-204ENST00000636474 1715 ntBASIC23.62■■□□□ 1.37
CSNK1G1Q9HCP0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CSNK1G1Q9HCP0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
CSNK1G1Q9HCP0 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.61■■□□□ 1.37
CSNK1G1Q9HCP0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.61■■□□□ 1.37
CSNK1G1Q9HCP0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CSNK1G1Q9HCP0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CSNK1G1Q9HCP0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.61■■□□□ 1.37
CSNK1G1Q9HCP0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CSNK1G1Q9HCP0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.6■■□□□ 1.37
CSNK1G1Q9HCP0 AL031432.3-201ENST00000607698 485 ntBASIC23.6■■□□□ 1.37
CSNK1G1Q9HCP0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CSNK1G1Q9HCP0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
CSNK1G1Q9HCP0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.59■■□□□ 1.37
CSNK1G1Q9HCP0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
CSNK1G1Q9HCP0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CSNK1G1Q9HCP0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.59■■□□□ 1.37
CSNK1G1Q9HCP0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.59■■□□□ 1.37
CSNK1G1Q9HCP0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.59■■□□□ 1.37
CSNK1G1Q9HCP0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CSNK1G1Q9HCP0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CSNK1G1Q9HCP0 AL499627.2-201ENST00000606283 725 ntBASIC23.59■■□□□ 1.37
CSNK1G1Q9HCP0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.59■■□□□ 1.37
CSNK1G1Q9HCP0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.59■■□□□ 1.37
CSNK1G1Q9HCP0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CSNK1G1Q9HCP0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CSNK1G1Q9HCP0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.59■■□□□ 1.37
CSNK1G1Q9HCP0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
CSNK1G1Q9HCP0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms