Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
BRD9Q9H8M2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
BRD9Q9H8M2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.3■■□□□ 1.32
BRD9Q9H8M2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
BRD9Q9H8M2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
BRD9Q9H8M2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
BRD9Q9H8M2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
BRD9Q9H8M2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
BRD9Q9H8M2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
BRD9Q9H8M2 AC138932.3-201ENST00000567634 1902 ntBASIC23.29■■□□□ 1.32
BRD9Q9H8M2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BRD9Q9H8M2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
BRD9Q9H8M2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.29■■□□□ 1.32
BRD9Q9H8M2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.29■■□□□ 1.32
BRD9Q9H8M2 YBX1P1-201ENST00000445822 960 ntBASIC23.29■■□□□ 1.32
BRD9Q9H8M2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BRD9Q9H8M2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRD9Q9H8M2 AP003733.4-201ENST00000623785 1697 ntBASIC23.28■■□□□ 1.32
BRD9Q9H8M2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.28■■□□□ 1.32
BRD9Q9H8M2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
BRD9Q9H8M2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.28■■□□□ 1.32
BRD9Q9H8M2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRD9Q9H8M2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.28■■□□□ 1.32
BRD9Q9H8M2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRD9Q9H8M2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRD9Q9H8M2 AC141586.4-201ENST00000624558 1573 ntBASIC23.27■■□□□ 1.32
BRD9Q9H8M2 HLA-L-211ENST00000482052 1765 ntBASIC23.27■■□□□ 1.32
BRD9Q9H8M2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BRD9Q9H8M2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
BRD9Q9H8M2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.27■■□□□ 1.32
BRD9Q9H8M2 SLC47A1P1-202ENST00000449666 945 ntBASIC23.27■■□□□ 1.32
BRD9Q9H8M2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.27■■□□□ 1.32
BRD9Q9H8M2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BRD9Q9H8M2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC23.27■■□□□ 1.32
BRD9Q9H8M2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
BRD9Q9H8M2 ALDH1A3-203ENST00000557963 1670 ntBASIC23.27■■□□□ 1.32
BRD9Q9H8M2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BRD9Q9H8M2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BRD9Q9H8M2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.27■■□□□ 1.32
BRD9Q9H8M2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BRD9Q9H8M2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.27■■□□□ 1.31
BRD9Q9H8M2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BRD9Q9H8M2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BRD9Q9H8M2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BRD9Q9H8M2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.26■■□□□ 1.31
BRD9Q9H8M2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BRD9Q9H8M2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.26■■□□□ 1.31
BRD9Q9H8M2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.26■■□□□ 1.31
BRD9Q9H8M2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.26■■□□□ 1.31
BRD9Q9H8M2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.26■■□□□ 1.31
BRD9Q9H8M2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BRD9Q9H8M2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.26■■□□□ 1.31
BRD9Q9H8M2 AC022517.1-201ENST00000592429 346 ntBASIC23.26■■□□□ 1.31
BRD9Q9H8M2 IKBKGP1-201ENST00000612193 1073 ntBASIC23.26■■□□□ 1.31
BRD9Q9H8M2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BRD9Q9H8M2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
BRD9Q9H8M2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BRD9Q9H8M2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BRD9Q9H8M2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BRD9Q9H8M2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.25■■□□□ 1.31
BRD9Q9H8M2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BRD9Q9H8M2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
BRD9Q9H8M2 AC090192.1-201ENST00000517740 490 ntBASIC23.25■■□□□ 1.31
BRD9Q9H8M2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.25■■□□□ 1.31
BRD9Q9H8M2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.25■■□□□ 1.31
BRD9Q9H8M2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.25■■□□□ 1.31
BRD9Q9H8M2 AL031602.1-201ENST00000633169 911 ntBASIC23.25■■□□□ 1.31
BRD9Q9H8M2 RARRES2P11-201ENST00000635158 484 ntBASIC23.25■■□□□ 1.31
BRD9Q9H8M2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.25■■□□□ 1.31
BRD9Q9H8M2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
BRD9Q9H8M2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.25■■□□□ 1.31
BRD9Q9H8M2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
BRD9Q9H8M2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
BRD9Q9H8M2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
BRD9Q9H8M2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.24■■□□□ 1.31
BRD9Q9H8M2 KRT18P5-201ENST00000436075 1291 ntBASIC23.24■■□□□ 1.31
BRD9Q9H8M2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.24■■□□□ 1.31
BRD9Q9H8M2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.24■■□□□ 1.31
BRD9Q9H8M2 AL137784.2-201ENST00000607332 1000 ntBASIC23.24■■□□□ 1.31
BRD9Q9H8M2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.24■■□□□ 1.31
BRD9Q9H8M2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.24■■□□□ 1.31
BRD9Q9H8M2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.24■■□□□ 1.31
BRD9Q9H8M2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
BRD9Q9H8M2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
BRD9Q9H8M2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
BRD9Q9H8M2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms