Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Ska1Q9CPV1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ska1Q9CPV1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ska1Q9CPV1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ska1Q9CPV1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ska1Q9CPV1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Ska1Q9CPV1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ska1Q9CPV1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ska1Q9CPV1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ska1Q9CPV1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ska1Q9CPV1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Ska1Q9CPV1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.91■□□□□ 0.62
Ska1Q9CPV1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ska1Q9CPV1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.91■□□□□ 0.62
Ska1Q9CPV1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.91■□□□□ 0.62
Ska1Q9CPV1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ska1Q9CPV1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ska1Q9CPV1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ska1Q9CPV1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ska1Q9CPV1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ska1Q9CPV1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ska1Q9CPV1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.91■□□□□ 0.62
Ska1Q9CPV1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ska1Q9CPV1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ska1Q9CPV1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ska1Q9CPV1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ska1Q9CPV1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ska1Q9CPV1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ska1Q9CPV1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ska1Q9CPV1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ska1Q9CPV1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ska1Q9CPV1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ska1Q9CPV1 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.89■□□□□ 0.61
Ska1Q9CPV1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ska1Q9CPV1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.89■□□□□ 0.61
Ska1Q9CPV1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.89■□□□□ 0.61
Ska1Q9CPV1 Gm43566-201ENSMUST00000196851 808 ntBASIC18.89■□□□□ 0.61
Ska1Q9CPV1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ska1Q9CPV1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ska1Q9CPV1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ska1Q9CPV1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ska1Q9CPV1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ska1Q9CPV1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ska1Q9CPV1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Ska1Q9CPV1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.89■□□□□ 0.61
Ska1Q9CPV1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ska1Q9CPV1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.88■□□□□ 0.61
Ska1Q9CPV1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ska1Q9CPV1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ska1Q9CPV1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ska1Q9CPV1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ska1Q9CPV1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.87■□□□□ 0.61
Ska1Q9CPV1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.87■□□□□ 0.61
Ska1Q9CPV1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ska1Q9CPV1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ska1Q9CPV1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ska1Q9CPV1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.87■□□□□ 0.61
Ska1Q9CPV1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.87■□□□□ 0.61
Ska1Q9CPV1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ska1Q9CPV1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ska1Q9CPV1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ska1Q9CPV1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ska1Q9CPV1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ska1Q9CPV1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ska1Q9CPV1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Ska1Q9CPV1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ska1Q9CPV1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ska1Q9CPV1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ska1Q9CPV1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ska1Q9CPV1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.86■□□□□ 0.61
Ska1Q9CPV1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ska1Q9CPV1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ska1Q9CPV1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ska1Q9CPV1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ska1Q9CPV1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ska1Q9CPV1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ska1Q9CPV1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ska1Q9CPV1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ska1Q9CPV1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ska1Q9CPV1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ska1Q9CPV1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ska1Q9CPV1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ska1Q9CPV1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Ska1Q9CPV1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ska1Q9CPV1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ska1Q9CPV1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ska1Q9CPV1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ska1Q9CPV1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ska1Q9CPV1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ska1Q9CPV1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Ska1Q9CPV1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Ska1Q9CPV1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ska1Q9CPV1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ska1Q9CPV1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ska1Q9CPV1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.82■□□□□ 0.6
Ska1Q9CPV1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ska1Q9CPV1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ska1Q9CPV1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ska1Q9CPV1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.82■□□□□ 0.6
Ska1Q9CPV1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms