Protein–RNA interactions for Protein: Q9BZR6

RTN4R, Reticulon-4 receptor, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RQ9BZR6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RTN4RQ9BZR6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RTN4RQ9BZR6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4RQ9BZR6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4RQ9BZR6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4RQ9BZR6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4RQ9BZR6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RTN4RQ9BZR6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.62■□□□□ 0.89
RTN4RQ9BZR6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.62■□□□□ 0.89
RTN4RQ9BZR6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.62■□□□□ 0.89
RTN4RQ9BZR6 AC079630.1-202ENST00000618127 1840 ntBASIC20.62■□□□□ 0.89
RTN4RQ9BZR6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RTN4RQ9BZR6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4RQ9BZR6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4RQ9BZR6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4RQ9BZR6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4RQ9BZR6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.61■□□□□ 0.89
RTN4RQ9BZR6 MIR4466-201ENST00000606121 54 ntBASIC20.61■□□□□ 0.89
RTN4RQ9BZR6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4RQ9BZR6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.61■□□□□ 0.89
RTN4RQ9BZR6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4RQ9BZR6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4RQ9BZR6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4RQ9BZR6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RTN4RQ9BZR6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4RQ9BZR6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4RQ9BZR6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4RQ9BZR6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.6■□□□□ 0.89
RTN4RQ9BZR6 AC131281.2-201ENST00000520478 145 ntBASIC20.6■□□□□ 0.89
RTN4RQ9BZR6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.6■□□□□ 0.89
RTN4RQ9BZR6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.6■□□□□ 0.89
RTN4RQ9BZR6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.6■□□□□ 0.89
RTN4RQ9BZR6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4RQ9BZR6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4RQ9BZR6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4RQ9BZR6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4RQ9BZR6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RTN4RQ9BZR6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4RQ9BZR6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4RQ9BZR6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.59■□□□□ 0.89
RTN4RQ9BZR6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.59■□□□□ 0.89
RTN4RQ9BZR6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RTN4RQ9BZR6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4RQ9BZR6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.59■□□□□ 0.89
RTN4RQ9BZR6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4RQ9BZR6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RTN4RQ9BZR6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTN4RQ9BZR6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTN4RQ9BZR6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTN4RQ9BZR6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.58■□□□□ 0.89
RTN4RQ9BZR6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.58■□□□□ 0.89
RTN4RQ9BZR6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.58■□□□□ 0.89
RTN4RQ9BZR6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.58■□□□□ 0.89
RTN4RQ9BZR6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RTN4RQ9BZR6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.58■□□□□ 0.88
RTN4RQ9BZR6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
RTN4RQ9BZR6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTN4RQ9BZR6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTN4RQ9BZR6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RTN4RQ9BZR6 C17orf82-201ENST00000623772 1530 ntBASIC20.58■□□□□ 0.88
RTN4RQ9BZR6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTN4RQ9BZR6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTN4RQ9BZR6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTN4RQ9BZR6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTN4RQ9BZR6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.57■□□□□ 0.88
RTN4RQ9BZR6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTN4RQ9BZR6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTN4RQ9BZR6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTN4RQ9BZR6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTN4RQ9BZR6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RTN4RQ9BZR6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RTN4RQ9BZR6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RTN4RQ9BZR6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.57■□□□□ 0.88
RTN4RQ9BZR6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.57■□□□□ 0.88
RTN4RQ9BZR6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTN4RQ9BZR6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RTN4RQ9BZR6 AC092068.2-201ENST00000590491 1708 ntBASIC20.56■□□□□ 0.88
RTN4RQ9BZR6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.56■□□□□ 0.88
RTN4RQ9BZR6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.56■□□□□ 0.88
RTN4RQ9BZR6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RTN4RQ9BZR6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.56■□□□□ 0.88
RTN4RQ9BZR6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTN4RQ9BZR6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.56■□□□□ 0.88
RTN4RQ9BZR6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RTN4RQ9BZR6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RTN4RQ9BZR6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4RQ9BZR6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.55■□□□□ 0.88
RTN4RQ9BZR6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.55■□□□□ 0.88
RTN4RQ9BZR6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4RQ9BZR6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4RQ9BZR6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.55■□□□□ 0.88
RTN4RQ9BZR6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4RQ9BZR6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.55■□□□□ 0.88
RTN4RQ9BZR6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RTN4RQ9BZR6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4RQ9BZR6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4RQ9BZR6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4RQ9BZR6 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.54■□□□□ 0.88
RTN4RQ9BZR6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTN4RQ9BZR6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms