Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.1■□□□□ 0.97
YIPF4Q9BSR8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
YIPF4Q9BSR8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
YIPF4Q9BSR8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.1■□□□□ 0.97
YIPF4Q9BSR8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
YIPF4Q9BSR8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
YIPF4Q9BSR8 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.1■□□□□ 0.97
YIPF4Q9BSR8 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.1■□□□□ 0.97
YIPF4Q9BSR8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
YIPF4Q9BSR8 AC092068.2-201ENST00000590491 1708 ntBASIC21.09■□□□□ 0.97
YIPF4Q9BSR8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.09■□□□□ 0.97
YIPF4Q9BSR8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YIPF4Q9BSR8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YIPF4Q9BSR8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
YIPF4Q9BSR8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
YIPF4Q9BSR8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
YIPF4Q9BSR8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
YIPF4Q9BSR8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
YIPF4Q9BSR8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
YIPF4Q9BSR8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
YIPF4Q9BSR8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
YIPF4Q9BSR8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
YIPF4Q9BSR8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.08■□□□□ 0.97
YIPF4Q9BSR8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.08■□□□□ 0.97
YIPF4Q9BSR8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
YIPF4Q9BSR8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
YIPF4Q9BSR8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
YIPF4Q9BSR8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
YIPF4Q9BSR8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
YIPF4Q9BSR8 AC239859.2-201ENST00000444165 318 ntBASIC21.07■□□□□ 0.96
YIPF4Q9BSR8 KRT125P-201ENST00000546827 989 ntBASIC21.07■□□□□ 0.96
YIPF4Q9BSR8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.07■□□□□ 0.96
YIPF4Q9BSR8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
YIPF4Q9BSR8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.07■□□□□ 0.96
YIPF4Q9BSR8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
YIPF4Q9BSR8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
YIPF4Q9BSR8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
YIPF4Q9BSR8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
YIPF4Q9BSR8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
YIPF4Q9BSR8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
YIPF4Q9BSR8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
YIPF4Q9BSR8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.06■□□□□ 0.96
YIPF4Q9BSR8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.06■□□□□ 0.96
YIPF4Q9BSR8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
YIPF4Q9BSR8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
YIPF4Q9BSR8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
YIPF4Q9BSR8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
YIPF4Q9BSR8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.06■□□□□ 0.96
YIPF4Q9BSR8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
YIPF4Q9BSR8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
YIPF4Q9BSR8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.05■□□□□ 0.96
YIPF4Q9BSR8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.05■□□□□ 0.96
YIPF4Q9BSR8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
YIPF4Q9BSR8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
YIPF4Q9BSR8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
YIPF4Q9BSR8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.05■□□□□ 0.96
YIPF4Q9BSR8 MIR4787-201ENST00000607364 84 ntBASIC21.05■□□□□ 0.96
YIPF4Q9BSR8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
YIPF4Q9BSR8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.05■□□□□ 0.96
YIPF4Q9BSR8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
YIPF4Q9BSR8 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
YIPF4Q9BSR8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF4Q9BSR8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF4Q9BSR8 AC079630.1-202ENST00000618127 1840 ntBASIC21.04■□□□□ 0.96
YIPF4Q9BSR8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF4Q9BSR8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF4Q9BSR8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF4Q9BSR8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF4Q9BSR8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
YIPF4Q9BSR8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.04■□□□□ 0.96
YIPF4Q9BSR8 DUSP8P3-201ENST00000399571 1760 ntBASIC21.04■□□□□ 0.96
YIPF4Q9BSR8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.04■□□□□ 0.96
YIPF4Q9BSR8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.04■□□□□ 0.96
YIPF4Q9BSR8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
YIPF4Q9BSR8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YIPF4Q9BSR8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
YIPF4Q9BSR8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YIPF4Q9BSR8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.03■□□□□ 0.96
YIPF4Q9BSR8 AL356441.2-201ENST00000443009 864 ntBASIC21.03■□□□□ 0.96
YIPF4Q9BSR8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
YIPF4Q9BSR8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.03■□□□□ 0.96
YIPF4Q9BSR8 AC092028.1-203ENST00000608262 953 ntBASIC21.03■□□□□ 0.96
YIPF4Q9BSR8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
YIPF4Q9BSR8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.03■□□□□ 0.96
YIPF4Q9BSR8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
YIPF4Q9BSR8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
YIPF4Q9BSR8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.02■□□□□ 0.96
YIPF4Q9BSR8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
YIPF4Q9BSR8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
YIPF4Q9BSR8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
YIPF4Q9BSR8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
YIPF4Q9BSR8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
YIPF4Q9BSR8 Z92544.1-202ENST00000571933 1220 ntBASIC21.02■□□□□ 0.96
YIPF4Q9BSR8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.02■□□□□ 0.96
YIPF4Q9BSR8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.02■□□□□ 0.96
YIPF4Q9BSR8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
YIPF4Q9BSR8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.02■□□□□ 0.96
YIPF4Q9BSR8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
YIPF4Q9BSR8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.02■□□□□ 0.95
YIPF4Q9BSR8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms