Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.61■□□□□ 0.41
Scrt1Q99M85 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scrt1Q99M85 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scrt1Q99M85 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Scrt1Q99M85 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scrt1Q99M85 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.61■□□□□ 0.41
Scrt1Q99M85 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scrt1Q99M85 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Scrt1Q99M85 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Scrt1Q99M85 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scrt1Q99M85 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scrt1Q99M85 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Scrt1Q99M85 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scrt1Q99M85 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Scrt1Q99M85 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.6■□□□□ 0.41
Scrt1Q99M85 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scrt1Q99M85 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Scrt1Q99M85 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Scrt1Q99M85 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scrt1Q99M85 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scrt1Q99M85 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Scrt1Q99M85 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scrt1Q99M85 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Scrt1Q99M85 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.59■□□□□ 0.41
Scrt1Q99M85 Gm43060-201ENSMUST00000200621 289 ntBASIC17.59■□□□□ 0.41
Scrt1Q99M85 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.59■□□□□ 0.41
Scrt1Q99M85 Gm40848-201ENSMUST00000221998 324 ntBASIC17.59■□□□□ 0.41
Scrt1Q99M85 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
Scrt1Q99M85 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scrt1Q99M85 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scrt1Q99M85 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Scrt1Q99M85 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scrt1Q99M85 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Scrt1Q99M85 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Scrt1Q99M85 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Scrt1Q99M85 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.58■□□□□ 0.4
Scrt1Q99M85 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.58■□□□□ 0.4
Scrt1Q99M85 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.58■□□□□ 0.4
Scrt1Q99M85 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Scrt1Q99M85 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Scrt1Q99M85 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scrt1Q99M85 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scrt1Q99M85 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scrt1Q99M85 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Scrt1Q99M85 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.57■□□□□ 0.4
Scrt1Q99M85 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scrt1Q99M85 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Scrt1Q99M85 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.57■□□□□ 0.4
Scrt1Q99M85 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scrt1Q99M85 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scrt1Q99M85 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scrt1Q99M85 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Scrt1Q99M85 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Scrt1Q99M85 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Scrt1Q99M85 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scrt1Q99M85 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.55■□□□□ 0.4
Scrt1Q99M85 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scrt1Q99M85 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
Scrt1Q99M85 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Scrt1Q99M85 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Scrt1Q99M85 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Scrt1Q99M85 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scrt1Q99M85 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scrt1Q99M85 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scrt1Q99M85 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.54■□□□□ 0.4
Scrt1Q99M85 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.54■□□□□ 0.4
Scrt1Q99M85 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scrt1Q99M85 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scrt1Q99M85 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scrt1Q99M85 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scrt1Q99M85 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scrt1Q99M85 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Scrt1Q99M85 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scrt1Q99M85 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Scrt1Q99M85 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scrt1Q99M85 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Scrt1Q99M85 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Scrt1Q99M85 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Scrt1Q99M85 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Scrt1Q99M85 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.53■□□□□ 0.4
Scrt1Q99M85 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scrt1Q99M85 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scrt1Q99M85 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scrt1Q99M85 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scrt1Q99M85 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scrt1Q99M85 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scrt1Q99M85 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scrt1Q99M85 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scrt1Q99M85 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scrt1Q99M85 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scrt1Q99M85 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Scrt1Q99M85 Gm7143-201ENSMUST00000222811 859 ntBASIC17.52■□□□□ 0.4
Scrt1Q99M85 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scrt1Q99M85 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scrt1Q99M85 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scrt1Q99M85 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Scrt1Q99M85 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scrt1Q99M85 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scrt1Q99M85 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Scrt1Q99M85 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms