Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdca3Q99M54 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdca3Q99M54 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cdca3Q99M54 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.58■□□□□ 0.56
Cdca3Q99M54 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdca3Q99M54 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cdca3Q99M54 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cdca3Q99M54 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cdca3Q99M54 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdca3Q99M54 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdca3Q99M54 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdca3Q99M54 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdca3Q99M54 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdca3Q99M54 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdca3Q99M54 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Cdca3Q99M54 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.57■□□□□ 0.56
Cdca3Q99M54 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.57■□□□□ 0.56
Cdca3Q99M54 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdca3Q99M54 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.57■□□□□ 0.56
Cdca3Q99M54 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cdca3Q99M54 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdca3Q99M54 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdca3Q99M54 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdca3Q99M54 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdca3Q99M54 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdca3Q99M54 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdca3Q99M54 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdca3Q99M54 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdca3Q99M54 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdca3Q99M54 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdca3Q99M54 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdca3Q99M54 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdca3Q99M54 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdca3Q99M54 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdca3Q99M54 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdca3Q99M54 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.55■□□□□ 0.56
Cdca3Q99M54 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.55■□□□□ 0.56
Cdca3Q99M54 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.55■□□□□ 0.56
Cdca3Q99M54 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdca3Q99M54 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cdca3Q99M54 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdca3Q99M54 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdca3Q99M54 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdca3Q99M54 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.54■□□□□ 0.56
Cdca3Q99M54 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.54■□□□□ 0.56
Cdca3Q99M54 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdca3Q99M54 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.54■□□□□ 0.56
Cdca3Q99M54 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Cdca3Q99M54 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdca3Q99M54 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdca3Q99M54 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.54■□□□□ 0.56
Cdca3Q99M54 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cdca3Q99M54 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdca3Q99M54 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdca3Q99M54 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cdca3Q99M54 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdca3Q99M54 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cdca3Q99M54 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdca3Q99M54 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cdca3Q99M54 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdca3Q99M54 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.53■□□□□ 0.56
Cdca3Q99M54 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdca3Q99M54 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdca3Q99M54 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdca3Q99M54 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdca3Q99M54 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdca3Q99M54 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdca3Q99M54 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdca3Q99M54 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdca3Q99M54 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.52■□□□□ 0.56
Cdca3Q99M54 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cdca3Q99M54 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdca3Q99M54 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cdca3Q99M54 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdca3Q99M54 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdca3Q99M54 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Cdca3Q99M54 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdca3Q99M54 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cdca3Q99M54 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdca3Q99M54 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdca3Q99M54 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdca3Q99M54 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdca3Q99M54 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.51■□□□□ 0.55
Cdca3Q99M54 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdca3Q99M54 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.51■□□□□ 0.55
Cdca3Q99M54 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cdca3Q99M54 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdca3Q99M54 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cdca3Q99M54 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdca3Q99M54 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdca3Q99M54 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdca3Q99M54 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdca3Q99M54 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdca3Q99M54 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdca3Q99M54 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdca3Q99M54 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdca3Q99M54 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdca3Q99M54 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.5■□□□□ 0.55
Cdca3Q99M54 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdca3Q99M54 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms