Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Gm27454-201ENSMUST00000185090 204 ntBASIC21.36■■□□□ 1.01
Pcdhb2Q91Y00 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb2Q91Y00 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb2Q91Y00 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhb2Q91Y00 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb2Q91Y00 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb2Q91Y00 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb2Q91Y00 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.35■■□□□ 1.01
Pcdhb2Q91Y00 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb2Q91Y00 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb2Q91Y00 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.35■■□□□ 1.01
Pcdhb2Q91Y00 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
Pcdhb2Q91Y00 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhb2Q91Y00 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pcdhb2Q91Y00 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb2Q91Y00 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb2Q91Y00 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
Pcdhb2Q91Y00 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb2Q91Y00 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb2Q91Y00 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb2Q91Y00 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhb2Q91Y00 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb2Q91Y00 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb2Q91Y00 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb2Q91Y00 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.33■■□□□ 1.01
Pcdhb2Q91Y00 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Pcdhb2Q91Y00 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhb2Q91Y00 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb2Q91Y00 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhb2Q91Y00 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb2Q91Y00 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Pcdhb2Q91Y00 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb2Q91Y00 Gm43137-201ENSMUST00000198052 594 ntBASIC21.32■■□□□ 1
Pcdhb2Q91Y00 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.32■■□□□ 1
Pcdhb2Q91Y00 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb2Q91Y00 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb2Q91Y00 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb2Q91Y00 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb2Q91Y00 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb2Q91Y00 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb2Q91Y00 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhb2Q91Y00 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb2Q91Y00 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Pcdhb2Q91Y00 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.31■■□□□ 1
Pcdhb2Q91Y00 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb2Q91Y00 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb2Q91Y00 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb2Q91Y00 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.31■■□□□ 1
Pcdhb2Q91Y00 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb2Q91Y00 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhb2Q91Y00 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.31■■□□□ 1
Pcdhb2Q91Y00 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Pcdhb2Q91Y00 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb2Q91Y00 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb2Q91Y00 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.3■■□□□ 1
Pcdhb2Q91Y00 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Pcdhb2Q91Y00 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.3■■□□□ 1
Pcdhb2Q91Y00 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Pcdhb2Q91Y00 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb2Q91Y00 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pcdhb2Q91Y00 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb2Q91Y00 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhb2Q91Y00 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.3■■□□□ 1
Pcdhb2Q91Y00 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.29■■□□□ 1
Pcdhb2Q91Y00 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb2Q91Y00 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb2Q91Y00 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb2Q91Y00 Gm45417-201ENSMUST00000209533 758 ntBASIC21.29■■□□□ 1
Pcdhb2Q91Y00 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb2Q91Y00 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb2Q91Y00 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb2Q91Y00 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb2Q91Y00 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb2Q91Y00 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Pcdhb2Q91Y00 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.28■■□□□ 1
Pcdhb2Q91Y00 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Pcdhb2Q91Y00 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb2Q91Y00 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb2Q91Y00 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb2Q91Y00 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb2Q91Y00 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb2Q91Y00 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb2Q91Y00 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb2Q91Y00 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb2Q91Y00 Gm15039-201ENSMUST00000118914 875 ntBASIC21.27■■□□□ 1
Pcdhb2Q91Y00 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb2Q91Y00 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.27■■□□□ 1
Pcdhb2Q91Y00 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb2Q91Y00 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.27■■□□□ 1
Pcdhb2Q91Y00 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb2Q91Y00 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb2Q91Y00 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb2Q91Y00 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb2Q91Y00 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdhb2Q91Y00 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.26■□□□□ 0.99
Pcdhb2Q91Y00 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb2Q91Y00 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb2Q91Y00 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb2Q91Y00 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb2Q91Y00 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 121.6 ms