Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Q8VDP2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q8VDP2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Q8VDP2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Q8VDP2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Q8VDP2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q8VDP2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Q8VDP2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q8VDP2 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.51■□□□□ 0.71
Q8VDP2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q8VDP2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q8VDP2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q8VDP2 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.51■□□□□ 0.71
Q8VDP2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q8VDP2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q8VDP2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Q8VDP2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Q8VDP2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Q8VDP2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Q8VDP2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q8VDP2 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.5■□□□□ 0.71
Q8VDP2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q8VDP2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q8VDP2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Q8VDP2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q8VDP2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q8VDP2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q8VDP2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Q8VDP2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q8VDP2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q8VDP2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Q8VDP2 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.49■□□□□ 0.71
Q8VDP2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q8VDP2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
Q8VDP2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Q8VDP2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q8VDP2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q8VDP2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q8VDP2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q8VDP2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q8VDP2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Q8VDP2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.48■□□□□ 0.71
Q8VDP2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Q8VDP2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.48■□□□□ 0.71
Q8VDP2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q8VDP2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.48■□□□□ 0.71
Q8VDP2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q8VDP2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q8VDP2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q8VDP2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q8VDP2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Q8VDP2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q8VDP2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Q8VDP2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q8VDP2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q8VDP2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q8VDP2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q8VDP2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q8VDP2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q8VDP2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q8VDP2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q8VDP2 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.46■□□□□ 0.71
Q8VDP2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q8VDP2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q8VDP2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q8VDP2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.46■□□□□ 0.71
Q8VDP2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Q8VDP2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Q8VDP2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.46■□□□□ 0.71
Q8VDP2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q8VDP2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Q8VDP2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q8VDP2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q8VDP2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.46■□□□□ 0.7
Q8VDP2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q8VDP2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Q8VDP2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Q8VDP2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q8VDP2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Q8VDP2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q8VDP2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Q8VDP2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Q8VDP2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q8VDP2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q8VDP2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q8VDP2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q8VDP2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Q8VDP2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q8VDP2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Q8VDP2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.44■□□□□ 0.7
Q8VDP2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.44■□□□□ 0.7
Q8VDP2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q8VDP2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q8VDP2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Q8VDP2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Q8VDP2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q8VDP2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q8VDP2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Q8VDP2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Q8VDP2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms