Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIMC1Q8NDZ2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIMC1Q8NDZ2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIMC1Q8NDZ2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIMC1Q8NDZ2 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.15■□□□□ 0.98
SIMC1Q8NDZ2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIMC1Q8NDZ2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.15■□□□□ 0.98
SIMC1Q8NDZ2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIMC1Q8NDZ2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIMC1Q8NDZ2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIMC1Q8NDZ2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SIMC1Q8NDZ2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SIMC1Q8NDZ2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIMC1Q8NDZ2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SIMC1Q8NDZ2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.14■□□□□ 0.97
SIMC1Q8NDZ2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SIMC1Q8NDZ2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.14■□□□□ 0.97
SIMC1Q8NDZ2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIMC1Q8NDZ2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIMC1Q8NDZ2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIMC1Q8NDZ2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SIMC1Q8NDZ2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SIMC1Q8NDZ2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIMC1Q8NDZ2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIMC1Q8NDZ2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SIMC1Q8NDZ2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SIMC1Q8NDZ2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIMC1Q8NDZ2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIMC1Q8NDZ2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIMC1Q8NDZ2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SIMC1Q8NDZ2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.12■□□□□ 0.97
SIMC1Q8NDZ2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.12■□□□□ 0.97
SIMC1Q8NDZ2 ANOS2P-203ENST00000472227 1816 ntBASIC21.12■□□□□ 0.97
SIMC1Q8NDZ2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.12■□□□□ 0.97
SIMC1Q8NDZ2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIMC1Q8NDZ2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SIMC1Q8NDZ2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.11■□□□□ 0.97
SIMC1Q8NDZ2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SIMC1Q8NDZ2 C9orf163-202ENST00000624034 2573 ntBASIC21.11■□□□□ 0.97
SIMC1Q8NDZ2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SIMC1Q8NDZ2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SIMC1Q8NDZ2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIMC1Q8NDZ2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SIMC1Q8NDZ2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SIMC1Q8NDZ2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.11■□□□□ 0.97
SIMC1Q8NDZ2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIMC1Q8NDZ2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIMC1Q8NDZ2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIMC1Q8NDZ2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SIMC1Q8NDZ2 KRT16P3-201ENST00000439127 1283 ntBASIC21.1■□□□□ 0.97
SIMC1Q8NDZ2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.1■□□□□ 0.97
SIMC1Q8NDZ2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.1■□□□□ 0.97
SIMC1Q8NDZ2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIMC1Q8NDZ2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.1■□□□□ 0.97
SIMC1Q8NDZ2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SIMC1Q8NDZ2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.1■□□□□ 0.97
SIMC1Q8NDZ2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SIMC1Q8NDZ2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIMC1Q8NDZ2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.09■□□□□ 0.97
SIMC1Q8NDZ2 AC005703.6-201ENST00000623265 1329 ntBASIC21.09■□□□□ 0.97
SIMC1Q8NDZ2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIMC1Q8NDZ2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SIMC1Q8NDZ2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIMC1Q8NDZ2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.09■□□□□ 0.97
SIMC1Q8NDZ2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SIMC1Q8NDZ2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SIMC1Q8NDZ2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SIMC1Q8NDZ2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SIMC1Q8NDZ2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SIMC1Q8NDZ2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SIMC1Q8NDZ2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SIMC1Q8NDZ2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.08■□□□□ 0.97
SIMC1Q8NDZ2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SIMC1Q8NDZ2 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.08■□□□□ 0.97
SIMC1Q8NDZ2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.08■□□□□ 0.97
SIMC1Q8NDZ2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SIMC1Q8NDZ2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.08■□□□□ 0.96
SIMC1Q8NDZ2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SIMC1Q8NDZ2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
SIMC1Q8NDZ2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.08■□□□□ 0.96
SIMC1Q8NDZ2 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SIMC1Q8NDZ2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SIMC1Q8NDZ2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SIMC1Q8NDZ2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.07■□□□□ 0.96
SIMC1Q8NDZ2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SIMC1Q8NDZ2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIMC1Q8NDZ2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.07■□□□□ 0.96
SIMC1Q8NDZ2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIMC1Q8NDZ2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIMC1Q8NDZ2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SIMC1Q8NDZ2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
SIMC1Q8NDZ2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIMC1Q8NDZ2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.07■□□□□ 0.96
SIMC1Q8NDZ2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
SIMC1Q8NDZ2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIMC1Q8NDZ2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIMC1Q8NDZ2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIMC1Q8NDZ2 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIMC1Q8NDZ2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms