Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCUBE3Q8IX30 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SCUBE3Q8IX30 ANOS2P-203ENST00000472227 1816 ntBASIC23.69■■□□□ 1.38
SCUBE3Q8IX30 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCUBE3Q8IX30 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SCUBE3Q8IX30 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.69■■□□□ 1.38
SCUBE3Q8IX30 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.69■■□□□ 1.38
SCUBE3Q8IX30 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SCUBE3Q8IX30 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCUBE3Q8IX30 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCUBE3Q8IX30 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCUBE3Q8IX30 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SCUBE3Q8IX30 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE3Q8IX30 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE3Q8IX30 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE3Q8IX30 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.68■■□□□ 1.38
SCUBE3Q8IX30 AL512631.2-201ENST00000604634 923 ntBASIC23.68■■□□□ 1.38
SCUBE3Q8IX30 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
SCUBE3Q8IX30 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.68■■□□□ 1.38
SCUBE3Q8IX30 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
SCUBE3Q8IX30 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.68■■□□□ 1.38
SCUBE3Q8IX30 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.68■■□□□ 1.38
SCUBE3Q8IX30 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE3Q8IX30 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SCUBE3Q8IX30 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SCUBE3Q8IX30 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SCUBE3Q8IX30 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.67■■□□□ 1.38
SCUBE3Q8IX30 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.67■■□□□ 1.38
SCUBE3Q8IX30 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.67■■□□□ 1.38
SCUBE3Q8IX30 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
SCUBE3Q8IX30 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SCUBE3Q8IX30 AC131281.2-201ENST00000520478 145 ntBASIC23.66■■□□□ 1.38
SCUBE3Q8IX30 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.66■■□□□ 1.38
SCUBE3Q8IX30 MIR4466-201ENST00000606121 54 ntBASIC23.66■■□□□ 1.38
SCUBE3Q8IX30 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
SCUBE3Q8IX30 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SCUBE3Q8IX30 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
SCUBE3Q8IX30 AC079630.1-202ENST00000618127 1840 ntBASIC23.66■■□□□ 1.38
SCUBE3Q8IX30 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
SCUBE3Q8IX30 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCUBE3Q8IX30 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.65■■□□□ 1.38
SCUBE3Q8IX30 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.65■■□□□ 1.38
SCUBE3Q8IX30 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCUBE3Q8IX30 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
SCUBE3Q8IX30 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCUBE3Q8IX30 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SCUBE3Q8IX30 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SCUBE3Q8IX30 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCUBE3Q8IX30 C17orf82-201ENST00000623772 1530 ntBASIC23.64■■□□□ 1.38
SCUBE3Q8IX30 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.64■■□□□ 1.38
SCUBE3Q8IX30 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
SCUBE3Q8IX30 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SCUBE3Q8IX30 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SCUBE3Q8IX30 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SCUBE3Q8IX30 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SCUBE3Q8IX30 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SCUBE3Q8IX30 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCUBE3Q8IX30 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.63■■□□□ 1.37
SCUBE3Q8IX30 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SCUBE3Q8IX30 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.63■■□□□ 1.37
SCUBE3Q8IX30 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.63■■□□□ 1.37
SCUBE3Q8IX30 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SCUBE3Q8IX30 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SCUBE3Q8IX30 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SCUBE3Q8IX30 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SCUBE3Q8IX30 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCUBE3Q8IX30 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCUBE3Q8IX30 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCUBE3Q8IX30 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.62■■□□□ 1.37
SCUBE3Q8IX30 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.62■■□□□ 1.37
SCUBE3Q8IX30 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCUBE3Q8IX30 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.62■■□□□ 1.37
SCUBE3Q8IX30 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SCUBE3Q8IX30 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCUBE3Q8IX30 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCUBE3Q8IX30 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCUBE3Q8IX30 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCUBE3Q8IX30 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.61■■□□□ 1.37
SCUBE3Q8IX30 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCUBE3Q8IX30 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCUBE3Q8IX30 AC008406.3-201ENST00000620001 1374 ntBASIC23.61■■□□□ 1.37
SCUBE3Q8IX30 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCUBE3Q8IX30 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCUBE3Q8IX30 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SCUBE3Q8IX30 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE3Q8IX30 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE3Q8IX30 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
SCUBE3Q8IX30 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
SCUBE3Q8IX30 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE3Q8IX30 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.6■■□□□ 1.37
SCUBE3Q8IX30 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE3Q8IX30 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.6■■□□□ 1.37
SCUBE3Q8IX30 AC092068.2-201ENST00000590491 1708 ntBASIC23.6■■□□□ 1.37
SCUBE3Q8IX30 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE3Q8IX30 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
SCUBE3Q8IX30 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.6■■□□□ 1.37
SCUBE3Q8IX30 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.6■■□□□ 1.37
SCUBE3Q8IX30 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE3Q8IX30 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SCUBE3Q8IX30 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms