Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.07■□□□□ 0.48
Lysmd4Q8CC84 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.07■□□□□ 0.48
Lysmd4Q8CC84 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.07■□□□□ 0.48
Lysmd4Q8CC84 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.07■□□□□ 0.48
Lysmd4Q8CC84 Gm12366-201ENSMUST00000121722 873 ntBASIC18.07■□□□□ 0.48
Lysmd4Q8CC84 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.07■□□□□ 0.48
Lysmd4Q8CC84 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.07■□□□□ 0.48
Lysmd4Q8CC84 Gm5786-201ENSMUST00000085368 882 ntBASIC18.07■□□□□ 0.48
Lysmd4Q8CC84 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lysmd4Q8CC84 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.07■□□□□ 0.48
Lysmd4Q8CC84 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lysmd4Q8CC84 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lysmd4Q8CC84 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lysmd4Q8CC84 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.06■□□□□ 0.48
Lysmd4Q8CC84 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lysmd4Q8CC84 Gm10420-201ENSMUST00000121713 882 ntBASIC18.06■□□□□ 0.48
Lysmd4Q8CC84 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lysmd4Q8CC84 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Lysmd4Q8CC84 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lysmd4Q8CC84 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lysmd4Q8CC84 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lysmd4Q8CC84 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd4Q8CC84 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd4Q8CC84 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd4Q8CC84 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd4Q8CC84 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd4Q8CC84 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd4Q8CC84 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd4Q8CC84 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd4Q8CC84 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lysmd4Q8CC84 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd4Q8CC84 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd4Q8CC84 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd4Q8CC84 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd4Q8CC84 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.04■□□□□ 0.48
Lysmd4Q8CC84 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Lysmd4Q8CC84 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Lysmd4Q8CC84 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.04■□□□□ 0.48
Lysmd4Q8CC84 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Lysmd4Q8CC84 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd4Q8CC84 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd4Q8CC84 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd4Q8CC84 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lysmd4Q8CC84 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Lysmd4Q8CC84 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Lysmd4Q8CC84 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lysmd4Q8CC84 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.02■□□□□ 0.48
Lysmd4Q8CC84 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.02■□□□□ 0.48
Lysmd4Q8CC84 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lysmd4Q8CC84 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.02■□□□□ 0.48
Lysmd4Q8CC84 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lysmd4Q8CC84 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lysmd4Q8CC84 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.02■□□□□ 0.48
Lysmd4Q8CC84 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lysmd4Q8CC84 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Lysmd4Q8CC84 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Lysmd4Q8CC84 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Lysmd4Q8CC84 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lysmd4Q8CC84 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lysmd4Q8CC84 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Lysmd4Q8CC84 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd4Q8CC84 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd4Q8CC84 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.01■□□□□ 0.47
Lysmd4Q8CC84 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.01■□□□□ 0.47
Lysmd4Q8CC84 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Lysmd4Q8CC84 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Lysmd4Q8CC84 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd4Q8CC84 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lysmd4Q8CC84 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd4Q8CC84 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18■□□□□ 0.47
Lysmd4Q8CC84 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms