Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC31.76■■■□□ 2.68
Rpap1Q80TE0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Rpap1Q80TE0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Rpap1Q80TE0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
Rpap1Q80TE0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC31.75■■■□□ 2.67
Rpap1Q80TE0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Rpap1Q80TE0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC31.75■■■□□ 2.67
Rpap1Q80TE0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Rpap1Q80TE0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Rpap1Q80TE0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Rpap1Q80TE0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC31.75■■■□□ 2.67
Rpap1Q80TE0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Rpap1Q80TE0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
Rpap1Q80TE0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Rpap1Q80TE0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Rpap1Q80TE0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC31.74■■■□□ 2.67
Rpap1Q80TE0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Rpap1Q80TE0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC31.74■■■□□ 2.67
Rpap1Q80TE0 Gm44949-201ENSMUST00000206423 1450 ntBASIC31.73■■■□□ 2.67
Rpap1Q80TE0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC31.73■■■□□ 2.67
Rpap1Q80TE0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC31.73■■■□□ 2.67
Rpap1Q80TE0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
Rpap1Q80TE0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC31.73■■■□□ 2.67
Rpap1Q80TE0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Rpap1Q80TE0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Rpap1Q80TE0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Rpap1Q80TE0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Rpap1Q80TE0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Rpap1Q80TE0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Rpap1Q80TE0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Rpap1Q80TE0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC31.71■■■□□ 2.67
Rpap1Q80TE0 Mir6236-201ENSMUST00000184437 123 ntBASIC31.71■■■□□ 2.67
Rpap1Q80TE0 Gm9988-201ENSMUST00000069786 435 ntBASIC31.71■■■□□ 2.67
Rpap1Q80TE0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC31.7■■■□□ 2.67
Rpap1Q80TE0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Rpap1Q80TE0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Rpap1Q80TE0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rpap1Q80TE0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
Rpap1Q80TE0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rpap1Q80TE0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rpap1Q80TE0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Rpap1Q80TE0 Gm14281-201ENSMUST00000121700 1294 ntBASIC31.68■■■□□ 2.66
Rpap1Q80TE0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
Rpap1Q80TE0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Rpap1Q80TE0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC31.68■■■□□ 2.66
Rpap1Q80TE0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Rpap1Q80TE0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC31.67■■■□□ 2.66
Rpap1Q80TE0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
Rpap1Q80TE0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC31.67■■■□□ 2.66
Rpap1Q80TE0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC31.67■■■□□ 2.66
Rpap1Q80TE0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC31.67■■■□□ 2.66
Rpap1Q80TE0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Rpap1Q80TE0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Rpap1Q80TE0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rpap1Q80TE0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC31.66■■■□□ 2.66
Rpap1Q80TE0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC31.66■■■□□ 2.66
Rpap1Q80TE0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rpap1Q80TE0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rpap1Q80TE0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rpap1Q80TE0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rpap1Q80TE0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rpap1Q80TE0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Rpap1Q80TE0 Reep4-203ENSMUST00000226563 1444 ntBASIC31.65■■■□□ 2.66
Rpap1Q80TE0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC31.65■■■□□ 2.66
Rpap1Q80TE0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Rpap1Q80TE0 Gm13234-201ENSMUST00000120010 747 ntBASIC31.65■■■□□ 2.66
Rpap1Q80TE0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Rpap1Q80TE0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
Rpap1Q80TE0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rpap1Q80TE0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC31.64■■■□□ 2.66
Rpap1Q80TE0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rpap1Q80TE0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
Rpap1Q80TE0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC31.64■■■□□ 2.66
Rpap1Q80TE0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC31.64■■■□□ 2.66
Rpap1Q80TE0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
Rpap1Q80TE0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC31.63■■■□□ 2.65
Rpap1Q80TE0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rpap1Q80TE0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Rpap1Q80TE0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rpap1Q80TE0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rpap1Q80TE0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC31.62■■■□□ 2.65
Rpap1Q80TE0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
Rpap1Q80TE0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Rpap1Q80TE0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rpap1Q80TE0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Rpap1Q80TE0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rpap1Q80TE0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rpap1Q80TE0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rpap1Q80TE0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rpap1Q80TE0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Rpap1Q80TE0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
Rpap1Q80TE0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC31.6■■■□□ 2.65
Rpap1Q80TE0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Rpap1Q80TE0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Rpap1Q80TE0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Rpap1Q80TE0 Ap3s1-204ENSMUST00000225520 957 ntBASIC31.58■■■□□ 2.65
Rpap1Q80TE0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
Rpap1Q80TE0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Rpap1Q80TE0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC31.58■■■□□ 2.65
Rpap1Q80TE0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms