Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Kdm3aQ6PCM1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Kdm3aQ6PCM1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Kdm3aQ6PCM1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Kdm3aQ6PCM1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Kdm3aQ6PCM1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Kdm3aQ6PCM1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC24.4■■□□□ 1.5
Kdm3aQ6PCM1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC24.4■■□□□ 1.5
Kdm3aQ6PCM1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Kdm3aQ6PCM1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Kdm3aQ6PCM1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Kdm3aQ6PCM1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Kdm3aQ6PCM1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Kdm3aQ6PCM1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC24.39■■□□□ 1.5
Kdm3aQ6PCM1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Kdm3aQ6PCM1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.39■■□□□ 1.5
Kdm3aQ6PCM1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Kdm3aQ6PCM1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Kdm3aQ6PCM1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC24.39■■□□□ 1.5
Kdm3aQ6PCM1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
Kdm3aQ6PCM1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.39■■□□□ 1.5
Kdm3aQ6PCM1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Kdm3aQ6PCM1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Kdm3aQ6PCM1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Kdm3aQ6PCM1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Kdm3aQ6PCM1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Kdm3aQ6PCM1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Kdm3aQ6PCM1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Kdm3aQ6PCM1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Kdm3aQ6PCM1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
Kdm3aQ6PCM1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Kdm3aQ6PCM1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Kdm3aQ6PCM1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Kdm3aQ6PCM1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Kdm3aQ6PCM1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Kdm3aQ6PCM1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Kdm3aQ6PCM1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Kdm3aQ6PCM1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Kdm3aQ6PCM1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC24.38■■□□□ 1.49
Kdm3aQ6PCM1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Kdm3aQ6PCM1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Kdm3aQ6PCM1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Kdm3aQ6PCM1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC24.38■■□□□ 1.49
Kdm3aQ6PCM1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Kdm3aQ6PCM1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC24.37■■□□□ 1.49
Kdm3aQ6PCM1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Kdm3aQ6PCM1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Kdm3aQ6PCM1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Kdm3aQ6PCM1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Kdm3aQ6PCM1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Kdm3aQ6PCM1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC24.36■■□□□ 1.49
Kdm3aQ6PCM1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Kdm3aQ6PCM1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Kdm3aQ6PCM1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kdm3aQ6PCM1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kdm3aQ6PCM1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC24.35■■□□□ 1.49
Kdm3aQ6PCM1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kdm3aQ6PCM1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
Kdm3aQ6PCM1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kdm3aQ6PCM1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kdm3aQ6PCM1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Kdm3aQ6PCM1 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Kdm3aQ6PCM1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Kdm3aQ6PCM1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Kdm3aQ6PCM1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Kdm3aQ6PCM1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Kdm3aQ6PCM1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Kdm3aQ6PCM1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Kdm3aQ6PCM1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Kdm3aQ6PCM1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Kdm3aQ6PCM1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Kdm3aQ6PCM1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Kdm3aQ6PCM1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Kdm3aQ6PCM1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Kdm3aQ6PCM1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC24.33■■□□□ 1.49
Kdm3aQ6PCM1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Kdm3aQ6PCM1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Kdm3aQ6PCM1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Kdm3aQ6PCM1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Kdm3aQ6PCM1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Kdm3aQ6PCM1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC24.32■■□□□ 1.48
Kdm3aQ6PCM1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Kdm3aQ6PCM1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Kdm3aQ6PCM1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Kdm3aQ6PCM1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Kdm3aQ6PCM1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Kdm3aQ6PCM1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Kdm3aQ6PCM1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Kdm3aQ6PCM1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC24.31■■□□□ 1.48
Kdm3aQ6PCM1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Kdm3aQ6PCM1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Kdm3aQ6PCM1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Kdm3aQ6PCM1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
Kdm3aQ6PCM1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Kdm3aQ6PCM1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Kdm3aQ6PCM1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC24.3■■□□□ 1.48
Kdm3aQ6PCM1 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC24.3■■□□□ 1.48
Kdm3aQ6PCM1 Gm26833-201ENSMUST00000180899 440 ntBASIC24.3■■□□□ 1.48
Kdm3aQ6PCM1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Kdm3aQ6PCM1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms