Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM78BQ5VT40 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
FAM78BQ5VT40 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
FAM78BQ5VT40 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM78BQ5VT40 AC026202.3-201ENST00000600805 1127 ntBASIC17.75■□□□□ 0.43
FAM78BQ5VT40 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.75■□□□□ 0.43
FAM78BQ5VT40 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM78BQ5VT40 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
FAM78BQ5VT40 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
FAM78BQ5VT40 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.74■□□□□ 0.43
FAM78BQ5VT40 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
FAM78BQ5VT40 AL161729.1-201ENST00000604104 1402 ntBASIC17.74■□□□□ 0.43
FAM78BQ5VT40 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
FAM78BQ5VT40 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.74■□□□□ 0.43
FAM78BQ5VT40 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.74■□□□□ 0.43
FAM78BQ5VT40 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FAM78BQ5VT40 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FAM78BQ5VT40 RAP2CP1-202ENST00000605179 643 ntBASIC17.74■□□□□ 0.43
FAM78BQ5VT40 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
FAM78BQ5VT40 AC127496.7-201ENST00000625110 1798 ntBASIC17.74■□□□□ 0.43
FAM78BQ5VT40 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FAM78BQ5VT40 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FAM78BQ5VT40 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
FAM78BQ5VT40 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
FAM78BQ5VT40 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
FAM78BQ5VT40 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FAM78BQ5VT40 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
FAM78BQ5VT40 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.73■□□□□ 0.43
FAM78BQ5VT40 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
FAM78BQ5VT40 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.73■□□□□ 0.43
FAM78BQ5VT40 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.73■□□□□ 0.43
FAM78BQ5VT40 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.73■□□□□ 0.43
FAM78BQ5VT40 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FAM78BQ5VT40 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FAM78BQ5VT40 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 HSD17B1P1-201ENST00000590052 955 ntBASIC17.72■□□□□ 0.43
FAM78BQ5VT40 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 AC090877.2-201ENST00000558441 1738 ntBASIC17.72■□□□□ 0.43
FAM78BQ5VT40 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.72■□□□□ 0.43
FAM78BQ5VT40 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FAM78BQ5VT40 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
FAM78BQ5VT40 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
FAM78BQ5VT40 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FAM78BQ5VT40 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.71■□□□□ 0.43
FAM78BQ5VT40 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.71■□□□□ 0.43
FAM78BQ5VT40 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FAM78BQ5VT40 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.71■□□□□ 0.43
FAM78BQ5VT40 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FAM78BQ5VT40 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.71■□□□□ 0.43
FAM78BQ5VT40 AC133552.2-201ENST00000619106 1032 ntBASIC17.71■□□□□ 0.43
FAM78BQ5VT40 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FAM78BQ5VT40 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FAM78BQ5VT40 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FAM78BQ5VT40 AC009831.1-201ENST00000580420 1582 ntBASIC17.7■□□□□ 0.42
FAM78BQ5VT40 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 RARRES2P2-201ENST00000394842 485 ntBASIC17.69■□□□□ 0.42
FAM78BQ5VT40 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
FAM78BQ5VT40 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms