Protein–RNA interactions for Protein: P98173

FAM3A, Protein FAM3A, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3AP98173 DUSP8P3-201ENST00000399571 1760 ntBASIC19.47■□□□□ 0.71
FAM3AP98173 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FAM3AP98173 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FAM3AP98173 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FAM3AP98173 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.47■□□□□ 0.71
FAM3AP98173 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
FAM3AP98173 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM3AP98173 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.47■□□□□ 0.71
FAM3AP98173 MIR6722-201ENST00000617286 78 ntBASIC19.47■□□□□ 0.71
FAM3AP98173 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.47■□□□□ 0.71
FAM3AP98173 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM3AP98173 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM3AP98173 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FAM3AP98173 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.47■□□□□ 0.71
FAM3AP98173 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM3AP98173 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM3AP98173 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.46■□□□□ 0.71
FAM3AP98173 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM3AP98173 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.46■□□□□ 0.71
FAM3AP98173 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.46■□□□□ 0.71
FAM3AP98173 KRT125P-201ENST00000546827 989 ntBASIC19.46■□□□□ 0.71
FAM3AP98173 C9orf163-202ENST00000624034 2573 ntBASIC19.46■□□□□ 0.71
FAM3AP98173 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.46■□□□□ 0.71
FAM3AP98173 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.46■□□□□ 0.71
FAM3AP98173 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FAM3AP98173 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM3AP98173 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
FAM3AP98173 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM3AP98173 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FAM3AP98173 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
FAM3AP98173 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM3AP98173 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
FAM3AP98173 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.45■□□□□ 0.7
FAM3AP98173 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.45■□□□□ 0.7
FAM3AP98173 AC092028.1-203ENST00000608262 953 ntBASIC19.45■□□□□ 0.7
FAM3AP98173 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FAM3AP98173 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM3AP98173 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.45■□□□□ 0.7
FAM3AP98173 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FAM3AP98173 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FAM3AP98173 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
FAM3AP98173 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FAM3AP98173 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FAM3AP98173 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FAM3AP98173 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.44■□□□□ 0.7
FAM3AP98173 AC009299.2-201ENST00000482477 511 ntBASIC19.44■□□□□ 0.7
FAM3AP98173 AL451085.2-201ENST00000605085 799 ntBASIC19.44■□□□□ 0.7
FAM3AP98173 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FAM3AP98173 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FAM3AP98173 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
FAM3AP98173 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
FAM3AP98173 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FAM3AP98173 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FAM3AP98173 AC239859.2-201ENST00000444165 318 ntBASIC19.43■□□□□ 0.7
FAM3AP98173 MIR4787-201ENST00000607364 84 ntBASIC19.43■□□□□ 0.7
FAM3AP98173 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.43■□□□□ 0.7
FAM3AP98173 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
FAM3AP98173 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FAM3AP98173 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.43■□□□□ 0.7
FAM3AP98173 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FAM3AP98173 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
FAM3AP98173 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FAM3AP98173 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FAM3AP98173 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FAM3AP98173 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM3AP98173 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
FAM3AP98173 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
FAM3AP98173 AC079630.1-202ENST00000618127 1840 ntBASIC19.42■□□□□ 0.7
FAM3AP98173 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.42■□□□□ 0.7
FAM3AP98173 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.42■□□□□ 0.7
FAM3AP98173 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
FAM3AP98173 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
FAM3AP98173 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.42■□□□□ 0.7
FAM3AP98173 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM3AP98173 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM3AP98173 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM3AP98173 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM3AP98173 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FAM3AP98173 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.41■□□□□ 0.7
FAM3AP98173 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.41■□□□□ 0.7
FAM3AP98173 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
FAM3AP98173 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM3AP98173 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.41■□□□□ 0.7
FAM3AP98173 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.41■□□□□ 0.7
FAM3AP98173 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
FAM3AP98173 AC005703.6-201ENST00000623265 1329 ntBASIC19.41■□□□□ 0.7
FAM3AP98173 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
FAM3AP98173 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FAM3AP98173 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.4■□□□□ 0.7
FAM3AP98173 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM3AP98173 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM3AP98173 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM3AP98173 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM3AP98173 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM3AP98173 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM3AP98173 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM3AP98173 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.4■□□□□ 0.7
FAM3AP98173 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FAM3AP98173 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FAM3AP98173 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms