Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Thumpd3P97770 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.36■□□□□ 0.85
Thumpd3P97770 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thumpd3P97770 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Thumpd3P97770 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Thumpd3P97770 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thumpd3P97770 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.36■□□□□ 0.85
Thumpd3P97770 Gm7417-201ENSMUST00000192950 473 ntBASIC20.36■□□□□ 0.85
Thumpd3P97770 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.36■□□□□ 0.85
Thumpd3P97770 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thumpd3P97770 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thumpd3P97770 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thumpd3P97770 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thumpd3P97770 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thumpd3P97770 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thumpd3P97770 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Thumpd3P97770 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Thumpd3P97770 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Thumpd3P97770 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Thumpd3P97770 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Thumpd3P97770 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Thumpd3P97770 Iqck-206ENSMUST00000208658 2891 ntBASIC20.35■□□□□ 0.85
Thumpd3P97770 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.35■□□□□ 0.85
Thumpd3P97770 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.35■□□□□ 0.85
Thumpd3P97770 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.35■□□□□ 0.85
Thumpd3P97770 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Thumpd3P97770 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Thumpd3P97770 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Thumpd3P97770 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Thumpd3P97770 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Thumpd3P97770 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.35■□□□□ 0.85
Thumpd3P97770 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Thumpd3P97770 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.34■□□□□ 0.85
Thumpd3P97770 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Thumpd3P97770 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Thumpd3P97770 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Thumpd3P97770 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.34■□□□□ 0.85
Thumpd3P97770 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Thumpd3P97770 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Thumpd3P97770 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Thumpd3P97770 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Thumpd3P97770 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Thumpd3P97770 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.33■□□□□ 0.85
Thumpd3P97770 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Thumpd3P97770 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Thumpd3P97770 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Thumpd3P97770 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Thumpd3P97770 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Thumpd3P97770 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Thumpd3P97770 Golph3-202ENSMUST00000226517 2359 ntBASIC20.32■□□□□ 0.84
Thumpd3P97770 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Thumpd3P97770 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Thumpd3P97770 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Thumpd3P97770 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Thumpd3P97770 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Thumpd3P97770 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.32■□□□□ 0.84
Thumpd3P97770 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Thumpd3P97770 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Thumpd3P97770 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Thumpd3P97770 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Thumpd3P97770 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.31■□□□□ 0.84
Thumpd3P97770 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Thumpd3P97770 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.31■□□□□ 0.84
Thumpd3P97770 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Thumpd3P97770 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Thumpd3P97770 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Thumpd3P97770 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Thumpd3P97770 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Thumpd3P97770 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Thumpd3P97770 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Thumpd3P97770 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Thumpd3P97770 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.3■□□□□ 0.84
Thumpd3P97770 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Thumpd3P97770 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Thumpd3P97770 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Thumpd3P97770 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Thumpd3P97770 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Thumpd3P97770 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Thumpd3P97770 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.29■□□□□ 0.84
Thumpd3P97770 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Thumpd3P97770 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.29■□□□□ 0.84
Thumpd3P97770 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.29■□□□□ 0.84
Thumpd3P97770 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Thumpd3P97770 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Thumpd3P97770 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Thumpd3P97770 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Thumpd3P97770 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Thumpd3P97770 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.28■□□□□ 0.84
Thumpd3P97770 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd3P97770 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd3P97770 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd3P97770 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd3P97770 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.28■□□□□ 0.84
Thumpd3P97770 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Thumpd3P97770 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.28■□□□□ 0.84
Thumpd3P97770 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd3P97770 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Thumpd3P97770 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd3P97770 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Thumpd3P97770 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms