Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six5P70178 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six5P70178 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Six5P70178 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six5P70178 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.8■□□□□ 0.6
Six5P70178 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Six5P70178 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Six5P70178 Golgb1-201ENSMUST00000023534 498 ntBASIC18.8■□□□□ 0.6
Six5P70178 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six5P70178 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six5P70178 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six5P70178 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six5P70178 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six5P70178 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Six5P70178 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six5P70178 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six5P70178 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Six5P70178 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Six5P70178 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Six5P70178 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Six5P70178 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six5P70178 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six5P70178 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six5P70178 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six5P70178 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six5P70178 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Six5P70178 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Six5P70178 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six5P70178 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Six5P70178 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.78■□□□□ 0.6
Six5P70178 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six5P70178 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Six5P70178 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six5P70178 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Six5P70178 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Six5P70178 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.78■□□□□ 0.6
Six5P70178 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.78■□□□□ 0.6
Six5P70178 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six5P70178 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Six5P70178 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six5P70178 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Six5P70178 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.77■□□□□ 0.6
Six5P70178 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.77■□□□□ 0.6
Six5P70178 Mir6236-201ENSMUST00000184437 123 ntBASIC18.77■□□□□ 0.6
Six5P70178 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.77■□□□□ 0.6
Six5P70178 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Six5P70178 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.77■□□□□ 0.6
Six5P70178 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Six5P70178 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Six5P70178 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Six5P70178 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Six5P70178 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six5P70178 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Six5P70178 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six5P70178 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.76■□□□□ 0.59
Six5P70178 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.76■□□□□ 0.59
Six5P70178 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six5P70178 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Six5P70178 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.76■□□□□ 0.59
Six5P70178 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Six5P70178 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Six5P70178 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six5P70178 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Six5P70178 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six5P70178 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six5P70178 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six5P70178 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Six5P70178 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six5P70178 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six5P70178 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.75■□□□□ 0.59
Six5P70178 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Six5P70178 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.74■□□□□ 0.59
Six5P70178 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six5P70178 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Six5P70178 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six5P70178 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Six5P70178 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Six5P70178 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six5P70178 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six5P70178 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six5P70178 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Six5P70178 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Six5P70178 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Six5P70178 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Six5P70178 Gm9847-201ENSMUST00000052528 599 ntBASIC18.74■□□□□ 0.59
Six5P70178 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Six5P70178 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Six5P70178 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Six5P70178 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six5P70178 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.73■□□□□ 0.59
Six5P70178 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six5P70178 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six5P70178 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six5P70178 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six5P70178 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six5P70178 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.73■□□□□ 0.59
Six5P70178 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Six5P70178 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Six5P70178 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Six5P70178 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms