Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NrlP54846 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NrlP54846 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NrlP54846 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.44■■□□□ 1.02
NrlP54846 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.44■■□□□ 1.02
NrlP54846 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NrlP54846 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NrlP54846 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
NrlP54846 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NrlP54846 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.44■■□□□ 1.02
NrlP54846 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.43■■□□□ 1.02
NrlP54846 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NrlP54846 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NrlP54846 Gm26571-201ENSMUST00000181399 666 ntBASIC21.43■■□□□ 1.02
NrlP54846 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.43■■□□□ 1.02
NrlP54846 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NrlP54846 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NrlP54846 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NrlP54846 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NrlP54846 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.43■■□□□ 1.02
NrlP54846 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NrlP54846 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
NrlP54846 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NrlP54846 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NrlP54846 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NrlP54846 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
NrlP54846 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.42■■□□□ 1.02
NrlP54846 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NrlP54846 Gm42569-201ENSMUST00000200539 472 ntBASIC21.42■■□□□ 1.02
NrlP54846 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NrlP54846 Gm40848-201ENSMUST00000221998 324 ntBASIC21.42■■□□□ 1.02
NrlP54846 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NrlP54846 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NrlP54846 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NrlP54846 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.42■■□□□ 1.02
NrlP54846 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
NrlP54846 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
NrlP54846 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
NrlP54846 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
NrlP54846 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.41■■□□□ 1.02
NrlP54846 Gm27405-201ENSMUST00000184201 112 ntBASIC21.41■■□□□ 1.02
NrlP54846 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.41■■□□□ 1.02
NrlP54846 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.41■■□□□ 1.02
NrlP54846 Gm42642-201ENSMUST00000200683 355 ntBASIC21.41■■□□□ 1.02
NrlP54846 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NrlP54846 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
NrlP54846 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.41■■□□□ 1.02
NrlP54846 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
NrlP54846 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NrlP54846 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NrlP54846 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NrlP54846 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.4■■□□□ 1.02
NrlP54846 Smad6-203ENSMUST00000179458 273 ntBASIC21.4■■□□□ 1.02
NrlP54846 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.4■■□□□ 1.02
NrlP54846 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.4■■□□□ 1.02
NrlP54846 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.4■■□□□ 1.02
NrlP54846 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.4■■□□□ 1.02
NrlP54846 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.4■■□□□ 1.02
NrlP54846 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
NrlP54846 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.39■■□□□ 1.02
NrlP54846 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
NrlP54846 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
NrlP54846 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NrlP54846 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NrlP54846 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
NrlP54846 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NrlP54846 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NrlP54846 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NrlP54846 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
NrlP54846 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NrlP54846 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NrlP54846 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.38■■□□□ 1.01
NrlP54846 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
NrlP54846 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NrlP54846 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
NrlP54846 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NrlP54846 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.37■■□□□ 1.01
NrlP54846 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NrlP54846 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NrlP54846 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NrlP54846 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.37■■□□□ 1.01
NrlP54846 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NrlP54846 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.37■■□□□ 1.01
NrlP54846 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.37■■□□□ 1.01
NrlP54846 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.37■■□□□ 1.01
NrlP54846 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NrlP54846 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NrlP54846 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.37■■□□□ 1.01
NrlP54846 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
NrlP54846 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NrlP54846 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NrlP54846 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
NrlP54846 Gm10849-201ENSMUST00000100397 618 ntBASIC21.36■■□□□ 1.01
NrlP54846 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.36■■□□□ 1.01
NrlP54846 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NrlP54846 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NrlP54846 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NrlP54846 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NrlP54846 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.35■■□□□ 1.01
NrlP54846 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms