Protein–RNA interactions for Protein: P54279

Pms2, Mismatch repair endonuclease PMS2, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pms2P54279 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pms2P54279 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pms2P54279 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pms2P54279 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pms2P54279 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pms2P54279 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pms2P54279 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pms2P54279 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.62■□□□□ 0.89
Pms2P54279 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.62■□□□□ 0.89
Pms2P54279 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pms2P54279 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pms2P54279 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pms2P54279 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pms2P54279 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pms2P54279 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pms2P54279 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pms2P54279 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pms2P54279 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.61■□□□□ 0.89
Pms2P54279 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pms2P54279 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.61■□□□□ 0.89
Pms2P54279 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pms2P54279 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pms2P54279 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pms2P54279 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pms2P54279 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pms2P54279 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pms2P54279 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pms2P54279 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pms2P54279 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pms2P54279 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pms2P54279 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pms2P54279 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pms2P54279 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pms2P54279 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.59■□□□□ 0.89
Pms2P54279 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.59■□□□□ 0.89
Pms2P54279 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.59■□□□□ 0.89
Pms2P54279 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pms2P54279 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pms2P54279 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pms2P54279 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pms2P54279 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pms2P54279 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pms2P54279 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pms2P54279 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pms2P54279 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pms2P54279 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.58■□□□□ 0.89
Pms2P54279 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.58■□□□□ 0.89
Pms2P54279 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pms2P54279 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pms2P54279 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pms2P54279 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Pms2P54279 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pms2P54279 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Pms2P54279 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pms2P54279 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pms2P54279 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.57■□□□□ 0.88
Pms2P54279 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.57■□□□□ 0.88
Pms2P54279 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pms2P54279 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pms2P54279 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pms2P54279 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pms2P54279 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pms2P54279 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pms2P54279 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Pms2P54279 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pms2P54279 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pms2P54279 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pms2P54279 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pms2P54279 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pms2P54279 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pms2P54279 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pms2P54279 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pms2P54279 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pms2P54279 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.55■□□□□ 0.88
Pms2P54279 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pms2P54279 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pms2P54279 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pms2P54279 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pms2P54279 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.55■□□□□ 0.88
Pms2P54279 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.55■□□□□ 0.88
Pms2P54279 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.55■□□□□ 0.88
Pms2P54279 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pms2P54279 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pms2P54279 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pms2P54279 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pms2P54279 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pms2P54279 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.55■□□□□ 0.88
Pms2P54279 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pms2P54279 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pms2P54279 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pms2P54279 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Pms2P54279 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pms2P54279 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pms2P54279 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pms2P54279 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pms2P54279 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pms2P54279 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pms2P54279 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pms2P54279 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pms2P54279 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms