Protein–RNA interactions for Protein: P51670

Ccl9, C-C motif chemokine 9, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl9P51670 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Ccl9P51670 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl9P51670 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ccl9P51670 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.6■□□□□ 0.41
Ccl9P51670 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ccl9P51670 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl9P51670 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl9P51670 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl9P51670 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl9P51670 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.6■□□□□ 0.41
Ccl9P51670 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.59■□□□□ 0.41
Ccl9P51670 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl9P51670 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ccl9P51670 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl9P51670 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ccl9P51670 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl9P51670 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl9P51670 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccl9P51670 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
Ccl9P51670 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ccl9P51670 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl9P51670 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl9P51670 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Ccl9P51670 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ccl9P51670 Gm10399-202ENSMUST00000202768 748 ntBASIC17.58■□□□□ 0.4
Ccl9P51670 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccl9P51670 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccl9P51670 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.58■□□□□ 0.4
Ccl9P51670 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl9P51670 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl9P51670 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ccl9P51670 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Ccl9P51670 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl9P51670 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl9P51670 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.57■□□□□ 0.4
Ccl9P51670 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl9P51670 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl9P51670 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl9P51670 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Ccl9P51670 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl9P51670 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl9P51670 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl9P51670 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl9P51670 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl9P51670 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl9P51670 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccl9P51670 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl9P51670 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl9P51670 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl9P51670 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccl9P51670 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccl9P51670 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl9P51670 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl9P51670 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccl9P51670 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl9P51670 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccl9P51670 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl9P51670 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl9P51670 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl9P51670 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl9P51670 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl9P51670 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl9P51670 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl9P51670 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl9P51670 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl9P51670 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl9P51670 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl9P51670 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl9P51670 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl9P51670 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccl9P51670 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ccl9P51670 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl9P51670 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccl9P51670 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl9P51670 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccl9P51670 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.53■□□□□ 0.4
Ccl9P51670 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl9P51670 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.53■□□□□ 0.4
Ccl9P51670 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl9P51670 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl9P51670 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl9P51670 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl9P51670 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl9P51670 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.53■□□□□ 0.4
Ccl9P51670 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl9P51670 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl9P51670 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl9P51670 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl9P51670 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.53■□□□□ 0.4
Ccl9P51670 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccl9P51670 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl9P51670 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl9P51670 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl9P51670 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl9P51670 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccl9P51670 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.52■□□□□ 0.4
Ccl9P51670 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ccl9P51670 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.52■□□□□ 0.4
Ccl9P51670 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.52■□□□□ 0.4
Ccl9P51670 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms