Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 DUX4L2-201ENST00000561772 1275 ntBASIC28.82■■■□□ 2.2
COL15A1P39059 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC28.82■■■□□ 2.2
COL15A1P39059 DUX4L6-201ENST00000626483 1275 ntBASIC28.82■■■□□ 2.2
COL15A1P39059 DUX4L1-201ENST00000627662 1275 ntBASIC28.82■■■□□ 2.2
COL15A1P39059 DUX4L8-201ENST00000629013 1275 ntBASIC28.82■■■□□ 2.2
COL15A1P39059 DUX4L3-201ENST00000630187 1275 ntBASIC28.82■■■□□ 2.2
COL15A1P39059 DUX4L7-201ENST00000630678 1275 ntBASIC28.82■■■□□ 2.2
COL15A1P39059 DUX4L5-201ENST00000630834 1275 ntBASIC28.82■■■□□ 2.2
COL15A1P39059 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
COL15A1P39059 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC28.82■■■□□ 2.2
COL15A1P39059 AC138932.3-201ENST00000567634 1902 ntBASIC28.81■■■□□ 2.2
COL15A1P39059 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC28.81■■■□□ 2.2
COL15A1P39059 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC28.81■■■□□ 2.2
COL15A1P39059 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC28.81■■■□□ 2.2
COL15A1P39059 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
COL15A1P39059 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
COL15A1P39059 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
COL15A1P39059 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
COL15A1P39059 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
COL15A1P39059 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC28.8■■■□□ 2.2
COL15A1P39059 AC027612.3-201ENST00000413684 1047 ntBASIC28.8■■■□□ 2.2
COL15A1P39059 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC28.8■■■□□ 2.2
COL15A1P39059 AC022517.1-201ENST00000592429 346 ntBASIC28.8■■■□□ 2.2
COL15A1P39059 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC28.8■■■□□ 2.2
COL15A1P39059 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC28.8■■■□□ 2.2
COL15A1P39059 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
COL15A1P39059 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
COL15A1P39059 ALDH1A3-203ENST00000557963 1670 ntBASIC28.8■■■□□ 2.2
COL15A1P39059 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
COL15A1P39059 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
COL15A1P39059 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
COL15A1P39059 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.79■■■□□ 2.2
COL15A1P39059 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC28.79■■■□□ 2.2
COL15A1P39059 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC28.79■■■□□ 2.2
COL15A1P39059 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
COL15A1P39059 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
COL15A1P39059 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
COL15A1P39059 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC28.79■■■□□ 2.2
COL15A1P39059 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL15A1P39059 NME4-202ENST00000382940 766 ntTSL 3 BASIC28.78■■■□□ 2.2
COL15A1P39059 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL15A1P39059 RAB43-208ENST00000615093 783 ntTSL 5 BASIC28.78■■■□□ 2.2
COL15A1P39059 NME4-211ENST00000620944 1193 ntTSL 2 BASIC28.78■■■□□ 2.2
COL15A1P39059 AC092437.1-201ENST00000624794 1048 ntBASIC28.78■■■□□ 2.2
COL15A1P39059 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
COL15A1P39059 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
COL15A1P39059 AC141586.4-201ENST00000624558 1573 ntBASIC28.78■■■□□ 2.2
COL15A1P39059 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC28.78■■■□□ 2.2
COL15A1P39059 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
COL15A1P39059 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
COL15A1P39059 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
COL15A1P39059 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL15A1P39059 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC28.77■■■□□ 2.2
COL15A1P39059 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
COL15A1P39059 IGHV3-19-201ENST00000521488 291 ntBASIC28.77■■■□□ 2.2
COL15A1P39059 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL15A1P39059 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
COL15A1P39059 AICDA-202ENST00000537228 667 ntTSL 5 BASIC28.77■■■□□ 2.2
COL15A1P39059 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC28.77■■■□□ 2.2
COL15A1P39059 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL15A1P39059 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL15A1P39059 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC28.77■■■□□ 2.2
COL15A1P39059 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL15A1P39059 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
COL15A1P39059 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
COL15A1P39059 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
COL15A1P39059 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC28.76■■■□□ 2.2
COL15A1P39059 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
COL15A1P39059 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
COL15A1P39059 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
COL15A1P39059 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
COL15A1P39059 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
COL15A1P39059 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC28.75■■■□□ 2.19
COL15A1P39059 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC28.75■■■□□ 2.19
COL15A1P39059 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
COL15A1P39059 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
COL15A1P39059 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC28.75■■■□□ 2.19
COL15A1P39059 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
COL15A1P39059 EED-207ENST00000528180 1745 ntTSL 5 BASIC28.75■■■□□ 2.19
COL15A1P39059 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC28.75■■■□□ 2.19
COL15A1P39059 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC28.75■■■□□ 2.19
COL15A1P39059 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
COL15A1P39059 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.75■■■□□ 2.19
COL15A1P39059 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
COL15A1P39059 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
COL15A1P39059 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC28.75■■■□□ 2.19
COL15A1P39059 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.74■■■□□ 2.19
COL15A1P39059 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC28.74■■■□□ 2.19
COL15A1P39059 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC28.74■■■□□ 2.19
COL15A1P39059 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL15A1P39059 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL15A1P39059 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC28.74■■■□□ 2.19
COL15A1P39059 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
COL15A1P39059 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
COL15A1P39059 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC28.74■■■□□ 2.19
COL15A1P39059 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.74■■■□□ 2.19
COL15A1P39059 AL358852.1-201ENST00000623174 1268 ntBASIC28.74■■■□□ 2.19
COL15A1P39059 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
COL15A1P39059 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC28.73■■■□□ 2.19
COL15A1P39059 EI24-204ENST00000527235 1625 ntTSL 5 BASIC28.73■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms