Protein–RNA interactions for Protein: P38789

SSF1, Ribosome biogenesis protein SSF1, yeastyeast

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSF1P38789 PGU1YJR153W 1086 nt6.65□□□□□ -1.34
SSF1P38789 AAD10YJR155W 867 nt6.65□□□□□ -1.34
SSF1P38789 DAL82YNL314W 768 nt6.65□□□□□ -1.34
SSF1P38789 PDX3YBR035C 687 nt6.65□□□□□ -1.34
SSF1P38789 MRP51YPL118W 1035 nt6.65□□□□□ -1.34
SSF1P38789 RPL7BYPL198W 735 nt6.65□□□□□ -1.34
SSF1P38789 BUL1YMR275C 2931 nt6.65□□□□□ -1.35
SSF1P38789 TOS4YLR183C 1470 nt6.65□□□□□ -1.35
SSF1P38789 SKN1YGR143W 2316 nt6.65□□□□□ -1.35
SSF1P38789 GGA1YDR358W 1674 nt6.65□□□□□ -1.35
SSF1P38789 AVT4YNL101W 2142 nt6.64□□□□□ -1.35
SSF1P38789 PAT1YCR077C 2391 nt6.64□□□□□ -1.35
SSF1P38789 ARP2YDL029W 1176 nt6.64□□□□□ -1.35
SSF1P38789 SCM3YDL139C 672 nt6.64□□□□□ -1.35
SSF1P38789 YFR032C-BYFR032C-B 264 nt6.64□□□□□ -1.35
SSF1P38789 VMA16YHR026W 642 nt6.64□□□□□ -1.35
SSF1P38789 PML39YML107C 1005 nt6.64□□□□□ -1.35
SSF1P38789 PGA3YML125C 939 nt6.64□□□□□ -1.35
SSF1P38789 PDR16YNL231C 1056 nt6.64□□□□□ -1.35
SSF1P38789 TMA16YOR252W 537 nt6.64□□□□□ -1.35
SSF1P38789 NHP6BYBR089C-A 300 nt6.64□□□□□ -1.35
SSF1P38789 TRK2YKR050W 2670 nt6.63□□□□□ -1.35
SSF1P38789 YGL036WYGL036W 2730 nt6.63□□□□□ -1.35
SSF1P38789 MRC1YCL061C 3291 nt6.63□□□□□ -1.35
SSF1P38789 YDL034WYDL034W 345 nt6.63□□□□□ -1.35
SSF1P38789 MOT2YER068W 1764 nt6.63□□□□□ -1.35
SSF1P38789 YLR462WYLR462W 609 nt6.63□□□□□ -1.35
SSF1P38789 YPR071WYPR071W 636 nt6.63□□□□□ -1.35
SSF1P38789 YPR202WYPR202W 717 nt6.63□□□□□ -1.35
SSF1P38789 GUA1YMR217W 1578 nt6.62□□□□□ -1.35
SSF1P38789 LDB17YDL146W 1476 nt6.62□□□□□ -1.35
SSF1P38789 RIO1YOR119C 1455 nt6.62□□□□□ -1.35
SSF1P38789 TEF1YPR080W 1377 nt6.62□□□□□ -1.35
SSF1P38789 TEF2YBR118W 1377 nt6.62□□□□□ -1.35
SSF1P38789 CTH1YDR151C 978 nt6.62□□□□□ -1.35
SSF1P38789 tN(GUU)CtN(GUU)C 74 nt6.62□□□□□ -1.35
SSF1P38789 tN(GUU)FtN(GUU)F 74 nt6.62□□□□□ -1.35
SSF1P38789 tN(GUU)GtN(GUU)G 74 nt6.62□□□□□ -1.35
SSF1P38789 tN(GUU)KtN(GUU)K 74 nt6.62□□□□□ -1.35
SSF1P38789 tN(GUU)LtN(GUU)L 74 nt6.62□□□□□ -1.35
SSF1P38789 tN(GUU)N1tN(GUU)N1 74 nt6.62□□□□□ -1.35
SSF1P38789 tN(GUU)N2tN(GUU)N2 74 nt6.62□□□□□ -1.35
SSF1P38789 tN(GUU)O1tN(GUU)O1 74 nt6.62□□□□□ -1.35
SSF1P38789 tN(GUU)O2tN(GUU)O2 74 nt6.62□□□□□ -1.35
SSF1P38789 tN(GUU)PtN(GUU)P 74 nt6.62□□□□□ -1.35
SSF1P38789 EST3YIL009C-A 546 nt6.62□□□□□ -1.35
SSF1P38789 RFC2YJR068W 1062 nt6.62□□□□□ -1.35
SSF1P38789 CCS1YMR038C 750 nt6.62□□□□□ -1.35
SSF1P38789 ROT1YMR200W 771 nt6.62□□□□□ -1.35
SSF1P38789 RBD2YPL246C 789 nt6.62□□□□□ -1.35
SSF1P38789 CNS1YBR155W 1158 nt6.62□□□□□ -1.35
SSF1P38789 YAP1801YHR161C 1914 nt6.62□□□□□ -1.35
SSF1P38789 APM3YBR288C 1452 nt6.61□□□□□ -1.35
SSF1P38789 AIR2YDL175C 1035 nt6.61□□□□□ -1.35
SSF1P38789 YUH1YJR099W 711 nt6.61□□□□□ -1.35
SSF1P38789 TFS1YLR178C 660 nt6.61□□□□□ -1.35
SSF1P38789 FYV6YNL133C 522 nt6.61□□□□□ -1.35
SSF1P38789 YOL131WYOL131W 327 nt6.61□□□□□ -1.35
SSF1P38789 EFT2YDR385W 2529 nt6.61□□□□□ -1.35
SSF1P38789 EFT1YOR133W 2529 nt6.61□□□□□ -1.35
SSF1P38789 APM2YHL019C 1818 nt6.61□□□□□ -1.35
SSF1P38789 SHE10YGL228W 1734 nt6.61□□□□□ -1.35
SSF1P38789 OCT1YKL134C 2319 nt6.6□□□□□ -1.35
SSF1P38789 YFR057WYFR057W 456 nt6.6□□□□□ -1.35
SSF1P38789 MRPL13YKR006C 795 nt6.6□□□□□ -1.35
SSF1P38789 CPR3YML078W 549 nt6.6□□□□□ -1.35
SSF1P38789 SHE1YBL031W 1017 nt6.6□□□□□ -1.35
SSF1P38789 ELA1YNL230C 1140 nt6.6□□□□□ -1.35
SSF1P38789 PNO1YOR145C 825 nt6.6□□□□□ -1.35
SSF1P38789 RPB8YOR224C 441 nt6.6□□□□□ -1.35
SSF1P38789 LDH1YBR204C 1128 nt6.6□□□□□ -1.35
SSF1P38789 ARO4YBR249C 1113 nt6.6□□□□□ -1.35
SSF1P38789 QDR3YBR043C 2070 nt6.6□□□□□ -1.35
SSF1P38789 HSF1YGL073W 2502 nt6.59□□□□□ -1.35
SSF1P38789 SFB3YHR098C 2790 nt6.59□□□□□ -1.35
SSF1P38789 RTT106YNL206C 1368 nt6.59□□□□□ -1.35
SSF1P38789 STR2YJR130C 1920 nt6.59□□□□□ -1.35
SSF1P38789 YHL044WYHL044W 708 nt6.59□□□□□ -1.35
SSF1P38789 HTD2YHR067W 843 nt6.59□□□□□ -1.35
SSF1P38789 COS9YKL219W 1224 nt6.59□□□□□ -1.35
SSF1P38789 YLR317WYLR317W 435 nt6.59□□□□□ -1.35
SSF1P38789 FAR3YMR052W 615 nt6.59□□□□□ -1.35
SSF1P38789 PLP2YOR281C 861 nt6.59□□□□□ -1.35
SSF1P38789 ARL3YPL051W 597 nt6.59□□□□□ -1.35
SSF1P38789 GRX5YPL059W 453 nt6.59□□□□□ -1.35
SSF1P38789 RPS9BYBR189W 588 nt6.59□□□□□ -1.35
SSF1P38789 PBP2YBR233W 1242 nt6.59□□□□□ -1.35
SSF1P38789 POP4YBR257W 840 nt6.59□□□□□ -1.35
SSF1P38789 DCV1YFR012W 609 nt6.58□□□□□ -1.36
SSF1P38789 YKL177WYKL177W 339 nt6.58□□□□□ -1.36
SSF1P38789 YOL097W-AYOL097W-A 186 nt6.58□□□□□ -1.36
SSF1P38789 UFE1YOR075W 1041 nt6.58□□□□□ -1.36
SSF1P38789 ARA1YBR149W 1035 nt6.58□□□□□ -1.36
SSF1P38789 HXT5YHR096C 1779 nt6.58□□□□□ -1.36
SSF1P38789 KEL1YHR158C 3495 nt6.57□□□□□ -1.36
SSF1P38789 KIN28YDL108W 921 nt6.57□□□□□ -1.36
SSF1P38789 snR7-LsnR7-L 214 nt6.57□□□□□ -1.36
SSF1P38789 LNP1YHR192W 837 nt6.57□□□□□ -1.36
SSF1P38789 HIS6YIL020C 786 nt6.57□□□□□ -1.36
SSF1P38789 GTT1YIR038C 705 nt6.57□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 31.6 ms