Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Upk2P38575 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.7■□□□□ 0.42
Upk2P38575 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk2P38575 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk2P38575 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk2P38575 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk2P38575 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Upk2P38575 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk2P38575 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk2P38575 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk2P38575 Gm14117-201ENSMUST00000122417 843 ntBASIC17.69■□□□□ 0.42
Upk2P38575 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.69■□□□□ 0.42
Upk2P38575 Gm43530-201ENSMUST00000195920 274 ntBASIC17.69■□□□□ 0.42
Upk2P38575 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.69■□□□□ 0.42
Upk2P38575 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Upk2P38575 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk2P38575 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk2P38575 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Upk2P38575 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk2P38575 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Upk2P38575 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Upk2P38575 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Upk2P38575 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Upk2P38575 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Upk2P38575 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Upk2P38575 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Upk2P38575 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Upk2P38575 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Upk2P38575 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk2P38575 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk2P38575 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Upk2P38575 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Upk2P38575 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.67■□□□□ 0.42
Upk2P38575 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Upk2P38575 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Upk2P38575 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk2P38575 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk2P38575 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.67■□□□□ 0.42
Upk2P38575 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk2P38575 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk2P38575 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Upk2P38575 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Upk2P38575 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk2P38575 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk2P38575 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.66■□□□□ 0.42
Upk2P38575 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk2P38575 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk2P38575 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk2P38575 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.66■□□□□ 0.42
Upk2P38575 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Upk2P38575 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Upk2P38575 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk2P38575 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk2P38575 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Upk2P38575 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Upk2P38575 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Upk2P38575 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk2P38575 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk2P38575 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.65■□□□□ 0.42
Upk2P38575 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Upk2P38575 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk2P38575 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.64■□□□□ 0.42
Upk2P38575 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk2P38575 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk2P38575 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk2P38575 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk2P38575 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk2P38575 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk2P38575 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Upk2P38575 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.63■□□□□ 0.41
Upk2P38575 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk2P38575 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.63■□□□□ 0.41
Upk2P38575 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.63■□□□□ 0.41
Upk2P38575 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk2P38575 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Upk2P38575 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.63■□□□□ 0.41
Upk2P38575 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.63■□□□□ 0.41
Upk2P38575 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk2P38575 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk2P38575 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk2P38575 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk2P38575 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Upk2P38575 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk2P38575 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Upk2P38575 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk2P38575 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk2P38575 Mir6236-201ENSMUST00000184437 123 ntBASIC17.62■□□□□ 0.41
Upk2P38575 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Upk2P38575 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.62■□□□□ 0.41
Upk2P38575 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.62■□□□□ 0.41
Upk2P38575 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk2P38575 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk2P38575 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk2P38575 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Upk2P38575 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk2P38575 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.61■□□□□ 0.41
Upk2P38575 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk2P38575 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk2P38575 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk2P38575 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms