Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
APEX1P27695 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
APEX1P27695 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.19■□□□□ 0.82
APEX1P27695 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.19■□□□□ 0.82
APEX1P27695 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
APEX1P27695 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
APEX1P27695 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
APEX1P27695 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
APEX1P27695 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
APEX1P27695 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
APEX1P27695 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
APEX1P27695 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
APEX1P27695 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
APEX1P27695 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.18■□□□□ 0.82
APEX1P27695 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
APEX1P27695 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.18■□□□□ 0.82
APEX1P27695 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.18■□□□□ 0.82
APEX1P27695 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
APEX1P27695 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
APEX1P27695 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
APEX1P27695 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
APEX1P27695 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
APEX1P27695 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
APEX1P27695 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
APEX1P27695 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
APEX1P27695 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
APEX1P27695 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
APEX1P27695 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
APEX1P27695 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
APEX1P27695 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
APEX1P27695 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APEX1P27695 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.16■□□□□ 0.82
APEX1P27695 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APEX1P27695 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.16■□□□□ 0.82
APEX1P27695 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.16■□□□□ 0.82
APEX1P27695 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
APEX1P27695 LINC00526-201ENST00000581067 1875 ntBASIC20.16■□□□□ 0.82
APEX1P27695 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APEX1P27695 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APEX1P27695 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.15■□□□□ 0.82
APEX1P27695 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.15■□□□□ 0.82
APEX1P27695 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
APEX1P27695 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
APEX1P27695 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
APEX1P27695 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.15■□□□□ 0.82
APEX1P27695 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
APEX1P27695 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
APEX1P27695 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
APEX1P27695 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
APEX1P27695 AC007375.3-201ENST00000600936 2314 ntBASIC20.14■□□□□ 0.82
APEX1P27695 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.14■□□□□ 0.81
APEX1P27695 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
APEX1P27695 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APEX1P27695 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
APEX1P27695 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.14■□□□□ 0.81
APEX1P27695 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APEX1P27695 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.14■□□□□ 0.81
APEX1P27695 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.14■□□□□ 0.81
APEX1P27695 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APEX1P27695 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.14■□□□□ 0.81
APEX1P27695 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
APEX1P27695 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.14■□□□□ 0.81
APEX1P27695 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
APEX1P27695 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APEX1P27695 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APEX1P27695 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
APEX1P27695 C1orf229-201ENST00000623686 2258 ntBASIC20.14■□□□□ 0.81
APEX1P27695 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
APEX1P27695 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
APEX1P27695 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
APEX1P27695 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APEX1P27695 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
APEX1P27695 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APEX1P27695 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
APEX1P27695 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.13■□□□□ 0.81
APEX1P27695 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
APEX1P27695 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
APEX1P27695 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APEX1P27695 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
APEX1P27695 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
APEX1P27695 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.13■□□□□ 0.81
APEX1P27695 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
APEX1P27695 AF131216.4-201ENST00000638924 1588 ntBASIC20.12■□□□□ 0.81
APEX1P27695 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
APEX1P27695 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
APEX1P27695 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
APEX1P27695 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
APEX1P27695 AC137767.1-201ENST00000602918 1920 ntBASIC20.12■□□□□ 0.81
APEX1P27695 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.12■□□□□ 0.81
APEX1P27695 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
APEX1P27695 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
APEX1P27695 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.11■□□□□ 0.81
APEX1P27695 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
APEX1P27695 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
APEX1P27695 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.11■□□□□ 0.81
APEX1P27695 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
APEX1P27695 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
APEX1P27695 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
APEX1P27695 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
APEX1P27695 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms