Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CTSDP07339 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTSDP07339 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTSDP07339 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CTSDP07339 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.67■□□□□ 0.58
CTSDP07339 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.67■□□□□ 0.58
CTSDP07339 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
CTSDP07339 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CTSDP07339 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.67■□□□□ 0.58
CTSDP07339 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.67■□□□□ 0.58
CTSDP07339 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.67■□□□□ 0.58
CTSDP07339 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.67■□□□□ 0.58
CTSDP07339 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.67■□□□□ 0.58
CTSDP07339 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTSDP07339 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSDP07339 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSDP07339 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSDP07339 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSDP07339 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSDP07339 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
CTSDP07339 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTSDP07339 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSDP07339 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSDP07339 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.66■□□□□ 0.58
CTSDP07339 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CTSDP07339 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTSDP07339 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSDP07339 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSDP07339 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CTSDP07339 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CTSDP07339 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CTSDP07339 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CTSDP07339 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSDP07339 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSDP07339 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSDP07339 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CTSDP07339 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.65■□□□□ 0.58
CTSDP07339 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.65■□□□□ 0.58
CTSDP07339 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSDP07339 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSDP07339 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSDP07339 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.65■□□□□ 0.58
CTSDP07339 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSDP07339 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSDP07339 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTSDP07339 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.65■□□□□ 0.58
CTSDP07339 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.65■□□□□ 0.58
CTSDP07339 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CTSDP07339 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.64■□□□□ 0.58
CTSDP07339 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.64■□□□□ 0.58
CTSDP07339 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.64■□□□□ 0.57
CTSDP07339 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSDP07339 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.64■□□□□ 0.57
CTSDP07339 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSDP07339 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTSDP07339 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSDP07339 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.64■□□□□ 0.57
CTSDP07339 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CTSDP07339 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CTSDP07339 AC009831.1-201ENST00000580420 1582 ntBASIC18.64■□□□□ 0.57
CTSDP07339 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSDP07339 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.63■□□□□ 0.57
CTSDP07339 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSDP07339 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSDP07339 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSDP07339 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CTSDP07339 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CTSDP07339 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.63■□□□□ 0.57
CTSDP07339 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSDP07339 AC131274.2-201ENST00000580697 1507 ntBASIC18.63■□□□□ 0.57
CTSDP07339 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CTSDP07339 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.63■□□□□ 0.57
CTSDP07339 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.63■□□□□ 0.57
CTSDP07339 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CTSDP07339 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSDP07339 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSDP07339 AC133552.2-201ENST00000619106 1032 ntBASIC18.62■□□□□ 0.57
CTSDP07339 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSDP07339 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSDP07339 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.62■□□□□ 0.57
CTSDP07339 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSDP07339 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSDP07339 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSDP07339 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSDP07339 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSDP07339 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSDP07339 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CTSDP07339 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CTSDP07339 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CTSDP07339 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
CTSDP07339 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.62■□□□□ 0.57
CTSDP07339 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSDP07339 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.61■□□□□ 0.57
CTSDP07339 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSDP07339 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CTSDP07339 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSDP07339 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSDP07339 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CTSDP07339 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CTSDP07339 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms