Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CD3DP04234 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.07■□□□□ 0.64
CD3DP04234 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD3DP04234 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD3DP04234 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CD3DP04234 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD3DP04234 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD3DP04234 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CD3DP04234 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.06■□□□□ 0.64
CD3DP04234 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CD3DP04234 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.06■□□□□ 0.64
CD3DP04234 RAP2CP1-202ENST00000605179 643 ntBASIC19.06■□□□□ 0.64
CD3DP04234 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CD3DP04234 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD3DP04234 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD3DP04234 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CD3DP04234 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CD3DP04234 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.06■□□□□ 0.64
CD3DP04234 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.06■□□□□ 0.64
CD3DP04234 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD3DP04234 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CD3DP04234 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CD3DP04234 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD3DP04234 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD3DP04234 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD3DP04234 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD3DP04234 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD3DP04234 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD3DP04234 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD3DP04234 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CD3DP04234 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD3DP04234 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CD3DP04234 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.05■□□□□ 0.64
CD3DP04234 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD3DP04234 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CD3DP04234 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.04■□□□□ 0.64
CD3DP04234 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD3DP04234 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD3DP04234 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.04■□□□□ 0.64
CD3DP04234 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD3DP04234 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD3DP04234 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD3DP04234 AC026202.3-201ENST00000600805 1127 ntBASIC19.04■□□□□ 0.64
CD3DP04234 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CD3DP04234 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD3DP04234 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CD3DP04234 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CD3DP04234 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.03■□□□□ 0.64
CD3DP04234 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD3DP04234 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.03■□□□□ 0.64
CD3DP04234 C11orf96-202ENST00000528572 1834 ntBASIC19.03■□□□□ 0.64
CD3DP04234 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD3DP04234 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CD3DP04234 AC007029.1-201ENST00000604183 313 ntBASIC19.03■□□□□ 0.64
CD3DP04234 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CD3DP04234 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.03■□□□□ 0.64
CD3DP04234 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CD3DP04234 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CD3DP04234 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CD3DP04234 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CD3DP04234 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD3DP04234 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD3DP04234 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD3DP04234 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD3DP04234 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CD3DP04234 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CD3DP04234 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CD3DP04234 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD3DP04234 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CD3DP04234 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CD3DP04234 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CD3DP04234 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD3DP04234 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD3DP04234 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD3DP04234 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD3DP04234 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CD3DP04234 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.02■□□□□ 0.64
CD3DP04234 AL022069.1-201ENST00000568025 1636 ntBASIC19.02■□□□□ 0.64
CD3DP04234 AC092053.2-201ENST00000640557 1818 ntBASIC19.02■□□□□ 0.63
CD3DP04234 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD3DP04234 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD3DP04234 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CD3DP04234 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD3DP04234 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD3DP04234 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD3DP04234 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CD3DP04234 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD3DP04234 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CD3DP04234 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
CD3DP04234 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.01■□□□□ 0.63
CD3DP04234 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD3DP04234 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD3DP04234 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD3DP04234 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.01■□□□□ 0.63
CD3DP04234 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD3DP04234 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD3DP04234 AC139530.1-201ENST00000575312 1977 ntBASIC19.01■□□□□ 0.63
CD3DP04234 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD3DP04234 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD3DP04234 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms