Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CfdP03953 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CfdP03953 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CfdP03953 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CfdP03953 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CfdP03953 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CfdP03953 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CfdP03953 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CfdP03953 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CfdP03953 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CfdP03953 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
CfdP03953 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.81■□□□□ 0.28
CfdP03953 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CfdP03953 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CfdP03953 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CfdP03953 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CfdP03953 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.81■□□□□ 0.28
CfdP03953 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CfdP03953 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CfdP03953 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CfdP03953 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CfdP03953 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.8■□□□□ 0.28
CfdP03953 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CfdP03953 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CfdP03953 Gm11687-201ENSMUST00000118911 886 ntBASIC16.8■□□□□ 0.28
CfdP03953 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.8■□□□□ 0.28
CfdP03953 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CfdP03953 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CfdP03953 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CfdP03953 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CfdP03953 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.8■□□□□ 0.28
CfdP03953 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CfdP03953 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CfdP03953 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CfdP03953 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CfdP03953 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CfdP03953 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CfdP03953 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CfdP03953 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CfdP03953 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CfdP03953 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CfdP03953 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CfdP03953 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CfdP03953 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CfdP03953 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CfdP03953 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.78■□□□□ 0.28
CfdP03953 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CfdP03953 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CfdP03953 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CfdP03953 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CfdP03953 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CfdP03953 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CfdP03953 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CfdP03953 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CfdP03953 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CfdP03953 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CfdP03953 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.77■□□□□ 0.27
CfdP03953 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CfdP03953 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CfdP03953 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CfdP03953 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CfdP03953 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CfdP03953 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CfdP03953 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CfdP03953 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CfdP03953 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CfdP03953 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CfdP03953 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CfdP03953 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.76■□□□□ 0.27
CfdP03953 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CfdP03953 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CfdP03953 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CfdP03953 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CfdP03953 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CfdP03953 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CfdP03953 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CfdP03953 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CfdP03953 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CfdP03953 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CfdP03953 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CfdP03953 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CfdP03953 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CfdP03953 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CfdP03953 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CfdP03953 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CfdP03953 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CfdP03953 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CfdP03953 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.74■□□□□ 0.27
CfdP03953 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CfdP03953 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CfdP03953 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CfdP03953 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CfdP03953 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CfdP03953 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CfdP03953 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CfdP03953 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.74■□□□□ 0.27
CfdP03953 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
CfdP03953 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CfdP03953 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CfdP03953 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms