Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC23.81■■□□□ 1.4
Slc4a4O88343 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Slc4a4O88343 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Slc4a4O88343 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Slc4a4O88343 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.8■■□□□ 1.4
Slc4a4O88343 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Slc4a4O88343 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Slc4a4O88343 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slc4a4O88343 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slc4a4O88343 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slc4a4O88343 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slc4a4O88343 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Slc4a4O88343 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Slc4a4O88343 Mir6236-201ENSMUST00000184437 123 ntBASIC23.79■■□□□ 1.4
Slc4a4O88343 Gm8493-201ENSMUST00000196881 489 ntBASIC23.79■■□□□ 1.4
Slc4a4O88343 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Slc4a4O88343 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
Slc4a4O88343 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.78■■□□□ 1.4
Slc4a4O88343 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC23.78■■□□□ 1.4
Slc4a4O88343 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slc4a4O88343 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slc4a4O88343 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Slc4a4O88343 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slc4a4O88343 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
Slc4a4O88343 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slc4a4O88343 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slc4a4O88343 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Slc4a4O88343 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slc4a4O88343 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slc4a4O88343 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slc4a4O88343 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slc4a4O88343 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slc4a4O88343 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Slc4a4O88343 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc4a4O88343 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Slc4a4O88343 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Slc4a4O88343 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Slc4a4O88343 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.77■■□□□ 1.4
Slc4a4O88343 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.77■■□□□ 1.4
Slc4a4O88343 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc4a4O88343 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.77■■□□□ 1.4
Slc4a4O88343 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Slc4a4O88343 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc4a4O88343 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc4a4O88343 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Slc4a4O88343 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Slc4a4O88343 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Slc4a4O88343 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.76■■□□□ 1.39
Slc4a4O88343 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.76■■□□□ 1.39
Slc4a4O88343 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Slc4a4O88343 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Slc4a4O88343 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Slc4a4O88343 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Slc4a4O88343 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
Slc4a4O88343 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.75■■□□□ 1.39
Slc4a4O88343 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Slc4a4O88343 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.75■■□□□ 1.39
Slc4a4O88343 Spcs1-204ENSMUST00000226782 949 ntBASIC23.75■■□□□ 1.39
Slc4a4O88343 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Slc4a4O88343 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Slc4a4O88343 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Slc4a4O88343 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Slc4a4O88343 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Slc4a4O88343 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Slc4a4O88343 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Slc4a4O88343 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.74■■□□□ 1.39
Slc4a4O88343 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Slc4a4O88343 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Slc4a4O88343 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Slc4a4O88343 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Slc4a4O88343 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Slc4a4O88343 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.74■■□□□ 1.39
Slc4a4O88343 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Slc4a4O88343 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Slc4a4O88343 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Slc4a4O88343 Gm43017-201ENSMUST00000198296 752 ntBASIC23.73■■□□□ 1.39
Slc4a4O88343 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Slc4a4O88343 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Slc4a4O88343 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Slc4a4O88343 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Slc4a4O88343 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC23.73■■□□□ 1.39
Slc4a4O88343 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc4a4O88343 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc4a4O88343 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc4a4O88343 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc4a4O88343 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Slc4a4O88343 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC23.72■■□□□ 1.39
Slc4a4O88343 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc4a4O88343 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc4a4O88343 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
Slc4a4O88343 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc4a4O88343 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Slc4a4O88343 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Slc4a4O88343 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Slc4a4O88343 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Slc4a4O88343 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Slc4a4O88343 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Slc4a4O88343 Gm43173-201ENSMUST00000202246 593 ntBASIC23.71■■□□□ 1.39
Slc4a4O88343 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Slc4a4O88343 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms