Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SncaO55042 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SncaO55042 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SncaO55042 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SncaO55042 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SncaO55042 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SncaO55042 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SncaO55042 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SncaO55042 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SncaO55042 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SncaO55042 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SncaO55042 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SncaO55042 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SncaO55042 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SncaO55042 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SncaO55042 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SncaO55042 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.6■□□□□ 0.25
SncaO55042 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SncaO55042 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SncaO55042 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SncaO55042 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SncaO55042 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SncaO55042 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SncaO55042 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SncaO55042 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SncaO55042 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SncaO55042 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.59■□□□□ 0.25
SncaO55042 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SncaO55042 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SncaO55042 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SncaO55042 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SncaO55042 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SncaO55042 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
SncaO55042 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.58■□□□□ 0.25
SncaO55042 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SncaO55042 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SncaO55042 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.58■□□□□ 0.24
SncaO55042 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.58■□□□□ 0.24
SncaO55042 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SncaO55042 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaO55042 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SncaO55042 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaO55042 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaO55042 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaO55042 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaO55042 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SncaO55042 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SncaO55042 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaO55042 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaO55042 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.57■□□□□ 0.24
SncaO55042 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.57■□□□□ 0.24
SncaO55042 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaO55042 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaO55042 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaO55042 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SncaO55042 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SncaO55042 Cap2-205ENSMUST00000225824 1634 ntBASIC16.56■□□□□ 0.24
SncaO55042 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaO55042 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaO55042 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
SncaO55042 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaO55042 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaO55042 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaO55042 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaO55042 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.56■□□□□ 0.24
SncaO55042 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaO55042 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaO55042 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaO55042 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaO55042 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaO55042 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SncaO55042 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaO55042 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SncaO55042 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SncaO55042 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SncaO55042 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.55■□□□□ 0.24
SncaO55042 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SncaO55042 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.55■□□□□ 0.24
SncaO55042 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SncaO55042 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SncaO55042 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.55■□□□□ 0.24
SncaO55042 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SncaO55042 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SncaO55042 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SncaO55042 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SncaO55042 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SncaO55042 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SncaO55042 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SncaO55042 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SncaO55042 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SncaO55042 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SncaO55042 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.54■□□□□ 0.24
SncaO55042 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SncaO55042 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SncaO55042 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SncaO55042 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SncaO55042 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SncaO55042 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SncaO55042 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SncaO55042 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms