Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Dkk1O54908 Gm28745-201ENSMUST00000190069 305 ntBASIC17.4■□□□□ 0.38
Dkk1O54908 Thoc7-209ENSMUST00000225325 765 ntBASIC17.4■□□□□ 0.38
Dkk1O54908 Gm9847-201ENSMUST00000052528 599 ntBASIC17.4■□□□□ 0.38
Dkk1O54908 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Dkk1O54908 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Dkk1O54908 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.4■□□□□ 0.38
Dkk1O54908 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Dkk1O54908 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Dkk1O54908 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dkk1O54908 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Dkk1O54908 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dkk1O54908 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Dkk1O54908 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dkk1O54908 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Dkk1O54908 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Dkk1O54908 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Dkk1O54908 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dkk1O54908 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Dkk1O54908 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Dkk1O54908 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dkk1O54908 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dkk1O54908 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.39■□□□□ 0.37
Dkk1O54908 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dkk1O54908 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Dkk1O54908 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Dkk1O54908 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dkk1O54908 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.38■□□□□ 0.37
Dkk1O54908 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dkk1O54908 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dkk1O54908 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Dkk1O54908 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Dkk1O54908 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dkk1O54908 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC17.37■□□□□ 0.37
Dkk1O54908 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dkk1O54908 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.37■□□□□ 0.37
Dkk1O54908 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Dkk1O54908 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Dkk1O54908 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.37■□□□□ 0.37
Dkk1O54908 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dkk1O54908 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dkk1O54908 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Dkk1O54908 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dkk1O54908 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Dkk1O54908 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dkk1O54908 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dkk1O54908 Gm21956-201ENSMUST00000179946 522 ntBASIC17.36■□□□□ 0.37
Dkk1O54908 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Dkk1O54908 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dkk1O54908 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Dkk1O54908 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dkk1O54908 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dkk1O54908 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dkk1O54908 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dkk1O54908 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dkk1O54908 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dkk1O54908 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dkk1O54908 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.35■□□□□ 0.37
Dkk1O54908 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dkk1O54908 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dkk1O54908 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Dkk1O54908 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Dkk1O54908 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dkk1O54908 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dkk1O54908 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Dkk1O54908 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Dkk1O54908 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dkk1O54908 Gm12813-201ENSMUST00000119615 902 ntBASIC17.34■□□□□ 0.37
Dkk1O54908 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.34■□□□□ 0.37
Dkk1O54908 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Dkk1O54908 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Dkk1O54908 Gm9519-201ENSMUST00000206108 1337 ntBASIC17.34■□□□□ 0.37
Dkk1O54908 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.34■□□□□ 0.37
Dkk1O54908 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Dkk1O54908 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Dkk1O54908 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Dkk1O54908 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Dkk1O54908 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Dkk1O54908 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.34■□□□□ 0.37
Dkk1O54908 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Dkk1O54908 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Dkk1O54908 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Dkk1O54908 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Dkk1O54908 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Dkk1O54908 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Dkk1O54908 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Dkk1O54908 Gm13241-201ENSMUST00000094493 780 ntBASIC17.33■□□□□ 0.36
Dkk1O54908 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Dkk1O54908 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Dkk1O54908 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Dkk1O54908 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Dkk1O54908 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Dkk1O54908 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Dkk1O54908 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.32■□□□□ 0.36
Dkk1O54908 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Dkk1O54908 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.32■□□□□ 0.36
Dkk1O54908 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC17.32■□□□□ 0.36
Dkk1O54908 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dkk1O54908 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Dkk1O54908 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms