Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
4933424G06RikA0A140LIP3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
4933424G06RikA0A140LIP3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
4933424G06RikA0A140LIP3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
4933424G06RikA0A140LIP3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
4933424G06RikA0A140LIP3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
4933424G06RikA0A140LIP3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.58■□□□□ 0.89
4933424G06RikA0A140LIP3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
4933424G06RikA0A140LIP3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
4933424G06RikA0A140LIP3 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.57■□□□□ 0.88
4933424G06RikA0A140LIP3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
4933424G06RikA0A140LIP3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
4933424G06RikA0A140LIP3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
4933424G06RikA0A140LIP3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
4933424G06RikA0A140LIP3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
4933424G06RikA0A140LIP3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
4933424G06RikA0A140LIP3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
4933424G06RikA0A140LIP3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
4933424G06RikA0A140LIP3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
4933424G06RikA0A140LIP3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
4933424G06RikA0A140LIP3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
4933424G06RikA0A140LIP3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
4933424G06RikA0A140LIP3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
4933424G06RikA0A140LIP3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.56■□□□□ 0.88
4933424G06RikA0A140LIP3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.56■□□□□ 0.88
4933424G06RikA0A140LIP3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
4933424G06RikA0A140LIP3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
4933424G06RikA0A140LIP3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
4933424G06RikA0A140LIP3 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.56■□□□□ 0.88
4933424G06RikA0A140LIP3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
4933424G06RikA0A140LIP3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
4933424G06RikA0A140LIP3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
4933424G06RikA0A140LIP3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
4933424G06RikA0A140LIP3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
4933424G06RikA0A140LIP3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
4933424G06RikA0A140LIP3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
4933424G06RikA0A140LIP3 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.55■□□□□ 0.88
4933424G06RikA0A140LIP3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
4933424G06RikA0A140LIP3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
4933424G06RikA0A140LIP3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
4933424G06RikA0A140LIP3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
4933424G06RikA0A140LIP3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
4933424G06RikA0A140LIP3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
4933424G06RikA0A140LIP3 Gm18284-201ENSMUST00000172604 624 ntBASIC20.54■□□□□ 0.88
4933424G06RikA0A140LIP3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.54■□□□□ 0.88
4933424G06RikA0A140LIP3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.54■□□□□ 0.88
4933424G06RikA0A140LIP3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
4933424G06RikA0A140LIP3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
4933424G06RikA0A140LIP3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
4933424G06RikA0A140LIP3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
4933424G06RikA0A140LIP3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
4933424G06RikA0A140LIP3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.53■□□□□ 0.88
4933424G06RikA0A140LIP3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
4933424G06RikA0A140LIP3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
4933424G06RikA0A140LIP3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.53■□□□□ 0.88
4933424G06RikA0A140LIP3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
4933424G06RikA0A140LIP3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
4933424G06RikA0A140LIP3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
4933424G06RikA0A140LIP3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
4933424G06RikA0A140LIP3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
4933424G06RikA0A140LIP3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
4933424G06RikA0A140LIP3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
4933424G06RikA0A140LIP3 Gm8495-201ENSMUST00000188740 694 ntBASIC20.52■□□□□ 0.88
4933424G06RikA0A140LIP3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
4933424G06RikA0A140LIP3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
4933424G06RikA0A140LIP3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
4933424G06RikA0A140LIP3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
4933424G06RikA0A140LIP3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
4933424G06RikA0A140LIP3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
4933424G06RikA0A140LIP3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
4933424G06RikA0A140LIP3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
4933424G06RikA0A140LIP3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
4933424G06RikA0A140LIP3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
4933424G06RikA0A140LIP3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
4933424G06RikA0A140LIP3 Gm26833-201ENSMUST00000180899 440 ntBASIC20.51■□□□□ 0.87
4933424G06RikA0A140LIP3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.51■□□□□ 0.87
4933424G06RikA0A140LIP3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
4933424G06RikA0A140LIP3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
4933424G06RikA0A140LIP3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
4933424G06RikA0A140LIP3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
4933424G06RikA0A140LIP3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
4933424G06RikA0A140LIP3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
4933424G06RikA0A140LIP3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
4933424G06RikA0A140LIP3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
4933424G06RikA0A140LIP3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
4933424G06RikA0A140LIP3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.5■□□□□ 0.87
4933424G06RikA0A140LIP3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
4933424G06RikA0A140LIP3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
4933424G06RikA0A140LIP3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
4933424G06RikA0A140LIP3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
4933424G06RikA0A140LIP3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
4933424G06RikA0A140LIP3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.49■□□□□ 0.87
4933424G06RikA0A140LIP3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
4933424G06RikA0A140LIP3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
4933424G06RikA0A140LIP3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
4933424G06RikA0A140LIP3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
4933424G06RikA0A140LIP3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.49■□□□□ 0.87
4933424G06RikA0A140LIP3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
4933424G06RikA0A140LIP3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
4933424G06RikA0A140LIP3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms