Protein–RNA interactions for Protein: A0A0N4SWI3

D6Ertd527e, DNA segment, Chr 6, ERATO Doi 527,-expressed, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
D6Ertd527eA0A0N4SWI3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC11.82□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC11.82□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Gm12933-201ENSMUST00000120203 872 ntBASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Dmtn-209ENSMUST00000228295 2572 ntBASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Gm10602-201ENSMUST00000098239 609 ntBASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
D6Ertd527eA0A0N4SWI3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
D6Ertd527eA0A0N4SWI3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
D6Ertd527eA0A0N4SWI3 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms