Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.72■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Gm12821-201ENSMUST00000120022 600 ntBASIC16.71■□□□□ 0.27
Ighv9-3A0A0B4J1J5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.71■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv9-3A0A0B4J1J5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv9-3A0A0B4J1J5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.7■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Ighv9-3A0A0B4J1J5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv9-3A0A0B4J1J5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.7■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv9-3A0A0B4J1J5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.68■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.68■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv9-3A0A0B4J1J5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.67■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.66■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.66■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ighv9-3A0A0B4J1J5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Gm27454-201ENSMUST00000185090 204 ntBASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
Ighv9-3A0A0B4J1J5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv9-3A0A0B4J1J5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv9-3A0A0B4J1J5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv9-3A0A0B4J1J5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ighv9-3A0A0B4J1J5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.64■□□□□ 0.25
Ighv9-3A0A0B4J1J5 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ighv9-3A0A0B4J1J5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms