Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.24■□□□□ 0.51
H2afb1S4R1E0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb1S4R1E0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb1S4R1E0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb1S4R1E0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2afb1S4R1E0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb1S4R1E0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.23■□□□□ 0.51
H2afb1S4R1E0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb1S4R1E0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
H2afb1S4R1E0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb1S4R1E0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
H2afb1S4R1E0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb1S4R1E0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H2afb1S4R1E0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb1S4R1E0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.22■□□□□ 0.51
H2afb1S4R1E0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
H2afb1S4R1E0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb1S4R1E0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.22■□□□□ 0.51
H2afb1S4R1E0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.22■□□□□ 0.51
H2afb1S4R1E0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb1S4R1E0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb1S4R1E0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb1S4R1E0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb1S4R1E0 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.22■□□□□ 0.51
H2afb1S4R1E0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb1S4R1E0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H2afb1S4R1E0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.21■□□□□ 0.51
H2afb1S4R1E0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb1S4R1E0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.21■□□□□ 0.51
H2afb1S4R1E0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
H2afb1S4R1E0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb1S4R1E0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb1S4R1E0 Gm5921-201ENSMUST00000075898 882 ntBASIC18.21■□□□□ 0.51
H2afb1S4R1E0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb1S4R1E0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb1S4R1E0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H2afb1S4R1E0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
H2afb1S4R1E0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb1S4R1E0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb1S4R1E0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb1S4R1E0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb1S4R1E0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb1S4R1E0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb1S4R1E0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb1S4R1E0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb1S4R1E0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb1S4R1E0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb1S4R1E0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
H2afb1S4R1E0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H2afb1S4R1E0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 Gm43566-201ENSMUST00000196851 808 ntBASIC18.19■□□□□ 0.5
H2afb1S4R1E0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
H2afb1S4R1E0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
H2afb1S4R1E0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb1S4R1E0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb1S4R1E0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb1S4R1E0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb1S4R1E0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb1S4R1E0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb1S4R1E0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2afb1S4R1E0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb1S4R1E0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb1S4R1E0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb1S4R1E0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
H2afb1S4R1E0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.17■□□□□ 0.5
H2afb1S4R1E0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb1S4R1E0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb1S4R1E0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb1S4R1E0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
H2afb1S4R1E0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb1S4R1E0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb1S4R1E0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H2afb1S4R1E0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb1S4R1E0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb1S4R1E0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb1S4R1E0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb1S4R1E0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb1S4R1E0 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.16■□□□□ 0.5
H2afb1S4R1E0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb1S4R1E0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb1S4R1E0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
H2afb1S4R1E0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb1S4R1E0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
H2afb1S4R1E0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
H2afb1S4R1E0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms