Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CSNK1G3Q9Y6M4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CSNK1G3Q9Y6M4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CSNK1G3Q9Y6M4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CSNK1G3Q9Y6M4 AC099791.1-201ENST00000416440 715 ntBASIC22.14■■□□□ 1.13
CSNK1G3Q9Y6M4 AC006455.2-201ENST00000429931 906 ntBASIC22.14■■□□□ 1.13
CSNK1G3Q9Y6M4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CSNK1G3Q9Y6M4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.14■■□□□ 1.13
CSNK1G3Q9Y6M4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CSNK1G3Q9Y6M4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.14■■□□□ 1.13
CSNK1G3Q9Y6M4 MIR6821-201ENST00000617625 74 ntBASIC22.14■■□□□ 1.13
CSNK1G3Q9Y6M4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CSNK1G3Q9Y6M4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CSNK1G3Q9Y6M4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CSNK1G3Q9Y6M4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.13■■□□□ 1.13
CSNK1G3Q9Y6M4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CSNK1G3Q9Y6M4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
CSNK1G3Q9Y6M4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSNK1G3Q9Y6M4 BX842568.3-201ENST00000418104 571 ntBASIC22.13■■□□□ 1.13
CSNK1G3Q9Y6M4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.13■■□□□ 1.13
CSNK1G3Q9Y6M4 AC233992.3-201ENST00000607491 485 ntBASIC22.13■■□□□ 1.13
CSNK1G3Q9Y6M4 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.13■■□□□ 1.13
CSNK1G3Q9Y6M4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CSNK1G3Q9Y6M4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.13■■□□□ 1.13
CSNK1G3Q9Y6M4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.13■■□□□ 1.13
CSNK1G3Q9Y6M4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.13■■□□□ 1.13
CSNK1G3Q9Y6M4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSNK1G3Q9Y6M4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSNK1G3Q9Y6M4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CSNK1G3Q9Y6M4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CSNK1G3Q9Y6M4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.12■■□□□ 1.13
CSNK1G3Q9Y6M4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.12■■□□□ 1.13
CSNK1G3Q9Y6M4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSNK1G3Q9Y6M4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSNK1G3Q9Y6M4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CSNK1G3Q9Y6M4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
CSNK1G3Q9Y6M4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CSNK1G3Q9Y6M4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CSNK1G3Q9Y6M4 IRS3P-201ENST00000223076 1006 ntBASIC22.11■■□□□ 1.13
CSNK1G3Q9Y6M4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.11■■□□□ 1.13
CSNK1G3Q9Y6M4 AC097381.1-201ENST00000429019 1296 ntBASIC22.11■■□□□ 1.13
CSNK1G3Q9Y6M4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CSNK1G3Q9Y6M4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
CSNK1G3Q9Y6M4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.11■■□□□ 1.13
CSNK1G3Q9Y6M4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CSNK1G3Q9Y6M4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CSNK1G3Q9Y6M4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CSNK1G3Q9Y6M4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.1■■□□□ 1.13
CSNK1G3Q9Y6M4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
CSNK1G3Q9Y6M4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.1■■□□□ 1.13
CSNK1G3Q9Y6M4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
CSNK1G3Q9Y6M4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
CSNK1G3Q9Y6M4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CSNK1G3Q9Y6M4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CSNK1G3Q9Y6M4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.09■■□□□ 1.13
CSNK1G3Q9Y6M4 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CSNK1G3Q9Y6M4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CSNK1G3Q9Y6M4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.09■■□□□ 1.13
CSNK1G3Q9Y6M4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CSNK1G3Q9Y6M4 AC092666.2-201ENST00000613287 246 ntBASIC22.09■■□□□ 1.13
CSNK1G3Q9Y6M4 AP003733.4-201ENST00000623785 1697 ntBASIC22.09■■□□□ 1.13
CSNK1G3Q9Y6M4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CSNK1G3Q9Y6M4 AC141586.4-201ENST00000624558 1573 ntBASIC22.08■■□□□ 1.13
CSNK1G3Q9Y6M4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CSNK1G3Q9Y6M4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.08■■□□□ 1.13
CSNK1G3Q9Y6M4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CSNK1G3Q9Y6M4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CSNK1G3Q9Y6M4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CSNK1G3Q9Y6M4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CSNK1G3Q9Y6M4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.08■■□□□ 1.13
CSNK1G3Q9Y6M4 AC104564.3-201ENST00000582367 638 ntBASIC22.08■■□□□ 1.13
CSNK1G3Q9Y6M4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CSNK1G3Q9Y6M4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.08■■□□□ 1.12
CSNK1G3Q9Y6M4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
CSNK1G3Q9Y6M4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.07■■□□□ 1.12
CSNK1G3Q9Y6M4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSNK1G3Q9Y6M4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.07■■□□□ 1.12
CSNK1G3Q9Y6M4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSNK1G3Q9Y6M4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.07■■□□□ 1.12
CSNK1G3Q9Y6M4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.07■■□□□ 1.12
CSNK1G3Q9Y6M4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.07■■□□□ 1.12
CSNK1G3Q9Y6M4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSNK1G3Q9Y6M4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSNK1G3Q9Y6M4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.07■■□□□ 1.12
CSNK1G3Q9Y6M4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSNK1G3Q9Y6M4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CSNK1G3Q9Y6M4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.06■■□□□ 1.12
CSNK1G3Q9Y6M4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.06■■□□□ 1.12
CSNK1G3Q9Y6M4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.06■■□□□ 1.12
CSNK1G3Q9Y6M4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.06■■□□□ 1.12
CSNK1G3Q9Y6M4 pRNA.6-201ENST00000610482 90 ntBASIC22.06■■□□□ 1.12
CSNK1G3Q9Y6M4 pRNA.5-201ENST00000612139 90 ntBASIC22.06■■□□□ 1.12
CSNK1G3Q9Y6M4 pRNA.11-201ENST00000618423 90 ntBASIC22.06■■□□□ 1.12
CSNK1G3Q9Y6M4 pRNA.13-201ENST00000619112 90 ntBASIC22.06■■□□□ 1.12
CSNK1G3Q9Y6M4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CSNK1G3Q9Y6M4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms