Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGC3Q9UN70 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGC3Q9UN70 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
PCDHGC3Q9UN70 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHGC3Q9UN70 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGC3Q9UN70 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGC3Q9UN70 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHGC3Q9UN70 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDHGC3Q9UN70 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDHGC3Q9UN70 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDHGC3Q9UN70 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.93■■□□□ 1.42
PCDHGC3Q9UN70 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.93■■□□□ 1.42
PCDHGC3Q9UN70 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.92■■□□□ 1.42
PCDHGC3Q9UN70 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.92■■□□□ 1.42
PCDHGC3Q9UN70 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGC3Q9UN70 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
PCDHGC3Q9UN70 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHGC3Q9UN70 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
PCDHGC3Q9UN70 MIR6724-1-201ENST00000616420 92 ntBASIC23.92■■□□□ 1.42
PCDHGC3Q9UN70 MIR6724-2-201ENST00000616483 92 ntBASIC23.92■■□□□ 1.42
PCDHGC3Q9UN70 MIR6724-4-201ENST00000617390 92 ntBASIC23.92■■□□□ 1.42
PCDHGC3Q9UN70 MIR6724-3-201ENST00000622482 92 ntBASIC23.92■■□□□ 1.42
PCDHGC3Q9UN70 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
PCDHGC3Q9UN70 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.92■■□□□ 1.42
PCDHGC3Q9UN70 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.92■■□□□ 1.42
PCDHGC3Q9UN70 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGC3Q9UN70 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGC3Q9UN70 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGC3Q9UN70 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.91■■□□□ 1.42
PCDHGC3Q9UN70 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDHGC3Q9UN70 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDHGC3Q9UN70 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.91■■□□□ 1.42
PCDHGC3Q9UN70 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHGC3Q9UN70 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
PCDHGC3Q9UN70 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.91■■□□□ 1.42
PCDHGC3Q9UN70 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGC3Q9UN70 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGC3Q9UN70 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGC3Q9UN70 AC079630.1-202ENST00000618127 1840 ntBASIC23.9■■□□□ 1.42
PCDHGC3Q9UN70 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGC3Q9UN70 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
PCDHGC3Q9UN70 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGC3Q9UN70 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGC3Q9UN70 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGC3Q9UN70 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHGC3Q9UN70 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDHGC3Q9UN70 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.42
PCDHGC3Q9UN70 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGC3Q9UN70 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGC3Q9UN70 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHGC3Q9UN70 DUSP8P3-201ENST00000399571 1760 ntBASIC23.89■■□□□ 1.42
PCDHGC3Q9UN70 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.89■■□□□ 1.41
PCDHGC3Q9UN70 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.89■■□□□ 1.41
PCDHGC3Q9UN70 KRT16P3-201ENST00000439127 1283 ntBASIC23.89■■□□□ 1.41
PCDHGC3Q9UN70 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGC3Q9UN70 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGC3Q9UN70 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGC3Q9UN70 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.89■■□□□ 1.41
PCDHGC3Q9UN70 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGC3Q9UN70 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGC3Q9UN70 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHGC3Q9UN70 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
PCDHGC3Q9UN70 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGC3Q9UN70 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGC3Q9UN70 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGC3Q9UN70 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGC3Q9UN70 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGC3Q9UN70 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
PCDHGC3Q9UN70 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGC3Q9UN70 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHGC3Q9UN70 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGC3Q9UN70 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.88■■□□□ 1.41
PCDHGC3Q9UN70 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGC3Q9UN70 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGC3Q9UN70 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHGC3Q9UN70 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
PCDHGC3Q9UN70 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGC3Q9UN70 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGC3Q9UN70 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGC3Q9UN70 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGC3Q9UN70 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHGC3Q9UN70 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.87■■□□□ 1.41
PCDHGC3Q9UN70 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGC3Q9UN70 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGC3Q9UN70 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGC3Q9UN70 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGC3Q9UN70 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHGC3Q9UN70 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.86■■□□□ 1.41
PCDHGC3Q9UN70 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
PCDHGC3Q9UN70 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGC3Q9UN70 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDHGC3Q9UN70 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGC3Q9UN70 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGC3Q9UN70 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGC3Q9UN70 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGC3Q9UN70 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGC3Q9UN70 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
PCDHGC3Q9UN70 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDHGC3Q9UN70 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGC3Q9UN70 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms