Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.74■■□□□ 1.07
SLC6A20Q9NP91 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC6A20Q9NP91 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A20Q9NP91 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A20Q9NP91 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A20Q9NP91 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A20Q9NP91 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
SLC6A20Q9NP91 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A20Q9NP91 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.73■■□□□ 1.07
SLC6A20Q9NP91 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC6A20Q9NP91 MIR4466-201ENST00000606121 54 ntBASIC21.73■■□□□ 1.07
SLC6A20Q9NP91 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SLC6A20Q9NP91 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A20Q9NP91 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A20Q9NP91 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A20Q9NP91 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SLC6A20Q9NP91 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A20Q9NP91 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A20Q9NP91 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC6A20Q9NP91 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A20Q9NP91 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A20Q9NP91 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC6A20Q9NP91 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A20Q9NP91 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SLC6A20Q9NP91 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SLC6A20Q9NP91 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A20Q9NP91 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A20Q9NP91 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A20Q9NP91 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A20Q9NP91 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SLC6A20Q9NP91 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC6A20Q9NP91 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A20Q9NP91 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC6A20Q9NP91 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC6A20Q9NP91 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC6A20Q9NP91 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
SLC6A20Q9NP91 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SLC6A20Q9NP91 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SLC6A20Q9NP91 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC6A20Q9NP91 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A20Q9NP91 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A20Q9NP91 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A20Q9NP91 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
SLC6A20Q9NP91 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A20Q9NP91 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC6A20Q9NP91 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 AL136116.3-201ENST00000402907 1138 ntBASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC6A20Q9NP91 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A20Q9NP91 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A20Q9NP91 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A20Q9NP91 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A20Q9NP91 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A20Q9NP91 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC6A20Q9NP91 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A20Q9NP91 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC6A20Q9NP91 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC6A20Q9NP91 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC6A20Q9NP91 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC6A20Q9NP91 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC6A20Q9NP91 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 C17orf82-201ENST00000623772 1530 ntBASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC6A20Q9NP91 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SLC6A20Q9NP91 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A20Q9NP91 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SLC6A20Q9NP91 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SLC6A20Q9NP91 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A20Q9NP91 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A20Q9NP91 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A20Q9NP91 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A20Q9NP91 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC6A20Q9NP91 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms