Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.77■■□□□ 1.4
CSNK1G1Q9HCP0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.77■■□□□ 1.4
CSNK1G1Q9HCP0 AL139246.5-201ENST00000606645 996 ntBASIC23.77■■□□□ 1.4
CSNK1G1Q9HCP0 AC241377.3-202ENST00000626088 1088 ntBASIC23.77■■□□□ 1.4
CSNK1G1Q9HCP0 AC241585.3-202ENST00000628937 1088 ntBASIC23.77■■□□□ 1.4
CSNK1G1Q9HCP0 AC245100.8-202ENST00000629247 1058 ntBASIC23.77■■□□□ 1.4
CSNK1G1Q9HCP0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CSNK1G1Q9HCP0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CSNK1G1Q9HCP0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.76■■□□□ 1.39
CSNK1G1Q9HCP0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CSNK1G1Q9HCP0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.76■■□□□ 1.39
CSNK1G1Q9HCP0 AC099791.2-201ENST00000605725 427 ntBASIC23.76■■□□□ 1.39
CSNK1G1Q9HCP0 AC092171.4-201ENST00000609130 632 ntBASIC23.76■■□□□ 1.39
CSNK1G1Q9HCP0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CSNK1G1Q9HCP0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CSNK1G1Q9HCP0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CSNK1G1Q9HCP0 DUX4L19-201ENST00000557448 1267 ntBASIC23.75■■□□□ 1.39
CSNK1G1Q9HCP0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.75■■□□□ 1.39
CSNK1G1Q9HCP0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.75■■□□□ 1.39
CSNK1G1Q9HCP0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSNK1G1Q9HCP0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSNK1G1Q9HCP0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CSNK1G1Q9HCP0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CSNK1G1Q9HCP0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSNK1G1Q9HCP0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CSNK1G1Q9HCP0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSNK1G1Q9HCP0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CSNK1G1Q9HCP0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CSNK1G1Q9HCP0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSNK1G1Q9HCP0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CSNK1G1Q9HCP0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CSNK1G1Q9HCP0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
CSNK1G1Q9HCP0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSNK1G1Q9HCP0 UNC93B3-201ENST00000308076 687 ntBASIC23.73■■□□□ 1.39
CSNK1G1Q9HCP0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.73■■□□□ 1.39
CSNK1G1Q9HCP0 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.73■■□□□ 1.39
CSNK1G1Q9HCP0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CSNK1G1Q9HCP0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.73■■□□□ 1.39
CSNK1G1Q9HCP0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G1Q9HCP0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G1Q9HCP0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G1Q9HCP0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G1Q9HCP0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G1Q9HCP0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.72■■□□□ 1.39
CSNK1G1Q9HCP0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G1Q9HCP0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.72■■□□□ 1.39
CSNK1G1Q9HCP0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G1Q9HCP0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G1Q9HCP0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G1Q9HCP0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G1Q9HCP0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G1Q9HCP0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CSNK1G1Q9HCP0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSNK1G1Q9HCP0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSNK1G1Q9HCP0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CSNK1G1Q9HCP0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.71■■□□□ 1.39
CSNK1G1Q9HCP0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.71■■□□□ 1.39
CSNK1G1Q9HCP0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CSNK1G1Q9HCP0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSNK1G1Q9HCP0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CSNK1G1Q9HCP0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CSNK1G1Q9HCP0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CSNK1G1Q9HCP0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CSNK1G1Q9HCP0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.7■■□□□ 1.38
CSNK1G1Q9HCP0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.38
CSNK1G1Q9HCP0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CSNK1G1Q9HCP0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CSNK1G1Q9HCP0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CSNK1G1Q9HCP0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CSNK1G1Q9HCP0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.7■■□□□ 1.38
CSNK1G1Q9HCP0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CSNK1G1Q9HCP0 AC093323.1-202ENST00000635031 2045 ntBASIC23.69■■□□□ 1.38
CSNK1G1Q9HCP0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CSNK1G1Q9HCP0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.69■■□□□ 1.38
CSNK1G1Q9HCP0 FP325331.1-202ENST00000623531 1380 ntBASIC23.69■■□□□ 1.38
CSNK1G1Q9HCP0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.69■■□□□ 1.38
CSNK1G1Q9HCP0 AC133561.4-201ENST00000566112 224 ntBASIC23.69■■□□□ 1.38
CSNK1G1Q9HCP0 AC106739.1-201ENST00000617035 715 ntBASIC23.69■■□□□ 1.38
CSNK1G1Q9HCP0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CSNK1G1Q9HCP0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CSNK1G1Q9HCP0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CSNK1G1Q9HCP0 MIR638-201ENST00000385237 100 ntBASIC23.68■■□□□ 1.38
CSNK1G1Q9HCP0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CSNK1G1Q9HCP0 AC006455.2-201ENST00000429931 906 ntBASIC23.68■■□□□ 1.38
CSNK1G1Q9HCP0 AL136162.1-201ENST00000607711 1078 ntBASIC23.68■■□□□ 1.38
CSNK1G1Q9HCP0 AC144652.1-201ENST00000609974 1624 ntBASIC23.68■■□□□ 1.38
CSNK1G1Q9HCP0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CSNK1G1Q9HCP0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSNK1G1Q9HCP0 SYT6-210ENST00000641643 1587 ntBASIC23.68■■□□□ 1.38
CSNK1G1Q9HCP0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CSNK1G1Q9HCP0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSNK1G1Q9HCP0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.68■■□□□ 1.38
CSNK1G1Q9HCP0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CSNK1G1Q9HCP0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CSNK1G1Q9HCP0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CSNK1G1Q9HCP0 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
CSNK1G1Q9HCP0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSNK1G1Q9HCP0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
CSNK1G1Q9HCP0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CSNK1G1Q9HCP0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms