Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
BRD9Q9H8M2 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.41■■□□□ 1.34
BRD9Q9H8M2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
BRD9Q9H8M2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.41■■□□□ 1.34
BRD9Q9H8M2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
BRD9Q9H8M2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.41■■□□□ 1.34
BRD9Q9H8M2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.41■■□□□ 1.34
BRD9Q9H8M2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
BRD9Q9H8M2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.4■■□□□ 1.34
BRD9Q9H8M2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.4■■□□□ 1.34
BRD9Q9H8M2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
BRD9Q9H8M2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
BRD9Q9H8M2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
BRD9Q9H8M2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
BRD9Q9H8M2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.39■■□□□ 1.33
BRD9Q9H8M2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
BRD9Q9H8M2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.39■■□□□ 1.33
BRD9Q9H8M2 AC126544.1-201ENST00000580842 1059 ntBASIC23.39■■□□□ 1.33
BRD9Q9H8M2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
BRD9Q9H8M2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
BRD9Q9H8M2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
BRD9Q9H8M2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
BRD9Q9H8M2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
BRD9Q9H8M2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.38■■□□□ 1.33
BRD9Q9H8M2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
BRD9Q9H8M2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
BRD9Q9H8M2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.38■■□□□ 1.33
BRD9Q9H8M2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
BRD9Q9H8M2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BRD9Q9H8M2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
BRD9Q9H8M2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
BRD9Q9H8M2 pRNA.6-201ENST00000610482 90 ntBASIC23.37■■□□□ 1.33
BRD9Q9H8M2 pRNA.5-201ENST00000612139 90 ntBASIC23.37■■□□□ 1.33
BRD9Q9H8M2 pRNA.11-201ENST00000618423 90 ntBASIC23.37■■□□□ 1.33
BRD9Q9H8M2 pRNA.13-201ENST00000619112 90 ntBASIC23.37■■□□□ 1.33
BRD9Q9H8M2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
BRD9Q9H8M2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 AC034268.1-201ENST00000441047 882 ntBASIC23.36■■□□□ 1.33
BRD9Q9H8M2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
BRD9Q9H8M2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.35■■□□□ 1.33
BRD9Q9H8M2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.35■■□□□ 1.33
BRD9Q9H8M2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
BRD9Q9H8M2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
BRD9Q9H8M2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.35■■□□□ 1.33
BRD9Q9H8M2 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BRD9Q9H8M2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
BRD9Q9H8M2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
BRD9Q9H8M2 AL161729.1-201ENST00000604104 1402 ntBASIC23.34■■□□□ 1.33
BRD9Q9H8M2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BRD9Q9H8M2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
BRD9Q9H8M2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
BRD9Q9H8M2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BRD9Q9H8M2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BRD9Q9H8M2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BRD9Q9H8M2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.34■■□□□ 1.33
BRD9Q9H8M2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
BRD9Q9H8M2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
BRD9Q9H8M2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
BRD9Q9H8M2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
BRD9Q9H8M2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.33■■□□□ 1.33
BRD9Q9H8M2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
BRD9Q9H8M2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.33■■□□□ 1.33
BRD9Q9H8M2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.33■■□□□ 1.33
BRD9Q9H8M2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
BRD9Q9H8M2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.32■■□□□ 1.32
BRD9Q9H8M2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.32■■□□□ 1.32
BRD9Q9H8M2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
BRD9Q9H8M2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.32■■□□□ 1.32
BRD9Q9H8M2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BRD9Q9H8M2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
BRD9Q9H8M2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BRD9Q9H8M2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC23.32■■□□□ 1.32
BRD9Q9H8M2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.32■■□□□ 1.32
BRD9Q9H8M2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
BRD9Q9H8M2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
BRD9Q9H8M2 TSPY26P-201ENST00000476365 1326 ntBASIC23.32■■□□□ 1.32
BRD9Q9H8M2 AC142381.3-201ENST00000568208 1670 ntBASIC23.32■■□□□ 1.32
BRD9Q9H8M2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
BRD9Q9H8M2 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms