Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hmg20aQ9DC33 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Hmg20aQ9DC33 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmg20aQ9DC33 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmg20aQ9DC33 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmg20aQ9DC33 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmg20aQ9DC33 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmg20aQ9DC33 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmg20aQ9DC33 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmg20aQ9DC33 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmg20aQ9DC33 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmg20aQ9DC33 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Hmg20aQ9DC33 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.38■□□□□ 0.53
Hmg20aQ9DC33 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.38■□□□□ 0.53
Hmg20aQ9DC33 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmg20aQ9DC33 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
Hmg20aQ9DC33 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.38■□□□□ 0.53
Hmg20aQ9DC33 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmg20aQ9DC33 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmg20aQ9DC33 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmg20aQ9DC33 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmg20aQ9DC33 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmg20aQ9DC33 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmg20aQ9DC33 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmg20aQ9DC33 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hmg20aQ9DC33 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmg20aQ9DC33 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmg20aQ9DC33 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmg20aQ9DC33 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmg20aQ9DC33 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmg20aQ9DC33 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmg20aQ9DC33 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Hmg20aQ9DC33 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmg20aQ9DC33 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmg20aQ9DC33 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmg20aQ9DC33 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmg20aQ9DC33 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmg20aQ9DC33 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmg20aQ9DC33 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.34■□□□□ 0.53
Hmg20aQ9DC33 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Hmg20aQ9DC33 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.34■□□□□ 0.53
Hmg20aQ9DC33 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
Hmg20aQ9DC33 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmg20aQ9DC33 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.34■□□□□ 0.53
Hmg20aQ9DC33 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmg20aQ9DC33 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.33■□□□□ 0.53
Hmg20aQ9DC33 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Hmg20aQ9DC33 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmg20aQ9DC33 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmg20aQ9DC33 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hmg20aQ9DC33 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Hmg20aQ9DC33 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.33■□□□□ 0.52
Hmg20aQ9DC33 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.33■□□□□ 0.52
Hmg20aQ9DC33 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hmg20aQ9DC33 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hmg20aQ9DC33 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Hmg20aQ9DC33 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Hmg20aQ9DC33 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20aQ9DC33 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Hmg20aQ9DC33 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.32■□□□□ 0.52
Hmg20aQ9DC33 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20aQ9DC33 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20aQ9DC33 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20aQ9DC33 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.32■□□□□ 0.52
Hmg20aQ9DC33 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20aQ9DC33 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Hmg20aQ9DC33 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20aQ9DC33 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.32■□□□□ 0.52
Hmg20aQ9DC33 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20aQ9DC33 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hmg20aQ9DC33 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20aQ9DC33 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20aQ9DC33 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20aQ9DC33 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20aQ9DC33 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.31■□□□□ 0.52
Hmg20aQ9DC33 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20aQ9DC33 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20aQ9DC33 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.31■□□□□ 0.52
Hmg20aQ9DC33 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20aQ9DC33 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20aQ9DC33 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Hmg20aQ9DC33 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20aQ9DC33 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20aQ9DC33 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hmg20aQ9DC33 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms