Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gm15039-201ENSMUST00000118914 875 ntBASIC20.78■□□□□ 0.92
Gtf2ird2Q99NI3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf2ird2Q99NI3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf2ird2Q99NI3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf2ird2Q99NI3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf2ird2Q99NI3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf2ird2Q99NI3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf2ird2Q99NI3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf2ird2Q99NI3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gtf2ird2Q99NI3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf2ird2Q99NI3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf2ird2Q99NI3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf2ird2Q99NI3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf2ird2Q99NI3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf2ird2Q99NI3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf2ird2Q99NI3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Gtf2ird2Q99NI3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.77■□□□□ 0.92
Gtf2ird2Q99NI3 Gm27454-201ENSMUST00000185090 204 ntBASIC20.77■□□□□ 0.92
Gtf2ird2Q99NI3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.77■□□□□ 0.92
Gtf2ird2Q99NI3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.77■□□□□ 0.92
Gtf2ird2Q99NI3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Gtf2ird2Q99NI3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2ird2Q99NI3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2ird2Q99NI3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Gtf2ird2Q99NI3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2ird2Q99NI3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2ird2Q99NI3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2ird2Q99NI3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2ird2Q99NI3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2ird2Q99NI3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2ird2Q99NI3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.76■□□□□ 0.91
Gtf2ird2Q99NI3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2ird2Q99NI3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gtf2ird2Q99NI3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf2ird2Q99NI3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf2ird2Q99NI3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf2ird2Q99NI3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gtf2ird2Q99NI3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Gtf2ird2Q99NI3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Gtf2ird2Q99NI3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf2ird2Q99NI3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf2ird2Q99NI3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf2ird2Q99NI3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.74■□□□□ 0.91
Gtf2ird2Q99NI3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf2ird2Q99NI3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf2ird2Q99NI3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Gtf2ird2Q99NI3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gtf2ird2Q99NI3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Gtf2ird2Q99NI3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf2ird2Q99NI3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf2ird2Q99NI3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf2ird2Q99NI3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Gtf2ird2Q99NI3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf2ird2Q99NI3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.73■□□□□ 0.91
Gtf2ird2Q99NI3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Gtf2ird2Q99NI3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf2ird2Q99NI3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gtf2ird2Q99NI3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf2ird2Q99NI3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf2ird2Q99NI3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf2ird2Q99NI3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gtf2ird2Q99NI3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2ird2Q99NI3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2ird2Q99NI3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2ird2Q99NI3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2ird2Q99NI3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Gtf2ird2Q99NI3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2ird2Q99NI3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2ird2Q99NI3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2ird2Q99NI3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Gtf2ird2Q99NI3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2ird2Q99NI3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gtf2ird2Q99NI3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.91
Gtf2ird2Q99NI3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.7■□□□□ 0.9
Gtf2ird2Q99NI3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.7■□□□□ 0.9
Gtf2ird2Q99NI3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf2ird2Q99NI3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf2ird2Q99NI3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf2ird2Q99NI3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf2ird2Q99NI3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf2ird2Q99NI3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gtf2ird2Q99NI3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf2ird2Q99NI3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf2ird2Q99NI3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf2ird2Q99NI3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf2ird2Q99NI3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf2ird2Q99NI3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf2ird2Q99NI3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf2ird2Q99NI3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf2ird2Q99NI3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf2ird2Q99NI3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Gtf2ird2Q99NI3 Gm45417-201ENSMUST00000209533 758 ntBASIC20.68■□□□□ 0.9
Gtf2ird2Q99NI3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf2ird2Q99NI3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Gtf2ird2Q99NI3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf2ird2Q99NI3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf2ird2Q99NI3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf2ird2Q99NI3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gtf2ird2Q99NI3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.67■□□□□ 0.9
Gtf2ird2Q99NI3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms