Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SIMC1Q8NDZ2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SIMC1Q8NDZ2 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIMC1Q8NDZ2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIMC1Q8NDZ2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIMC1Q8NDZ2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.24■□□□□ 0.99
SIMC1Q8NDZ2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.24■□□□□ 0.99
SIMC1Q8NDZ2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIMC1Q8NDZ2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIMC1Q8NDZ2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIMC1Q8NDZ2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.24■□□□□ 0.99
SIMC1Q8NDZ2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIMC1Q8NDZ2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SIMC1Q8NDZ2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIMC1Q8NDZ2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIMC1Q8NDZ2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIMC1Q8NDZ2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIMC1Q8NDZ2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIMC1Q8NDZ2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.23■□□□□ 0.99
SIMC1Q8NDZ2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIMC1Q8NDZ2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIMC1Q8NDZ2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIMC1Q8NDZ2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIMC1Q8NDZ2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIMC1Q8NDZ2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIMC1Q8NDZ2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIMC1Q8NDZ2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SIMC1Q8NDZ2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIMC1Q8NDZ2 GUSBP5-201ENST00000418136 578 ntBASIC21.22■□□□□ 0.99
SIMC1Q8NDZ2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.22■□□□□ 0.99
SIMC1Q8NDZ2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.22■□□□□ 0.99
SIMC1Q8NDZ2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SIMC1Q8NDZ2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.22■□□□□ 0.99
SIMC1Q8NDZ2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
SIMC1Q8NDZ2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIMC1Q8NDZ2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIMC1Q8NDZ2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SIMC1Q8NDZ2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.22■□□□□ 0.99
SIMC1Q8NDZ2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SIMC1Q8NDZ2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SIMC1Q8NDZ2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SIMC1Q8NDZ2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.21■□□□□ 0.99
SIMC1Q8NDZ2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SIMC1Q8NDZ2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SIMC1Q8NDZ2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.21■□□□□ 0.99
SIMC1Q8NDZ2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.21■□□□□ 0.99
SIMC1Q8NDZ2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SIMC1Q8NDZ2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SIMC1Q8NDZ2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIMC1Q8NDZ2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIMC1Q8NDZ2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIMC1Q8NDZ2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.2■□□□□ 0.98
SIMC1Q8NDZ2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIMC1Q8NDZ2 AC019069.1-201ENST00000610008 1333 ntBASIC21.2■□□□□ 0.98
SIMC1Q8NDZ2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.2■□□□□ 0.98
SIMC1Q8NDZ2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIMC1Q8NDZ2 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.19■□□□□ 0.98
SIMC1Q8NDZ2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SIMC1Q8NDZ2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SIMC1Q8NDZ2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.19■□□□□ 0.98
SIMC1Q8NDZ2 MIR6722-201ENST00000617286 78 ntBASIC21.19■□□□□ 0.98
SIMC1Q8NDZ2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIMC1Q8NDZ2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIMC1Q8NDZ2 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.19■□□□□ 0.98
SIMC1Q8NDZ2 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.19■□□□□ 0.98
SIMC1Q8NDZ2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIMC1Q8NDZ2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.18■□□□□ 0.98
SIMC1Q8NDZ2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SIMC1Q8NDZ2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIMC1Q8NDZ2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
SIMC1Q8NDZ2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIMC1Q8NDZ2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.18■□□□□ 0.98
SIMC1Q8NDZ2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.18■□□□□ 0.98
SIMC1Q8NDZ2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.18■□□□□ 0.98
SIMC1Q8NDZ2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SIMC1Q8NDZ2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIMC1Q8NDZ2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.18■□□□□ 0.98
SIMC1Q8NDZ2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SIMC1Q8NDZ2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIMC1Q8NDZ2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIMC1Q8NDZ2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIMC1Q8NDZ2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.17■□□□□ 0.98
SIMC1Q8NDZ2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIMC1Q8NDZ2 MTDHP2-201ENST00000601468 714 ntBASIC21.17■□□□□ 0.98
SIMC1Q8NDZ2 AC010997.5-201ENST00000609182 354 ntBASIC21.17■□□□□ 0.98
SIMC1Q8NDZ2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIMC1Q8NDZ2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIMC1Q8NDZ2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIMC1Q8NDZ2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SIMC1Q8NDZ2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIMC1Q8NDZ2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIMC1Q8NDZ2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SIMC1Q8NDZ2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.16■□□□□ 0.98
SIMC1Q8NDZ2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.16■□□□□ 0.98
SIMC1Q8NDZ2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.16■□□□□ 0.98
SIMC1Q8NDZ2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIMC1Q8NDZ2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms