Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.44■□□□□ 0.54
Ebf4Q8K4J2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.44■□□□□ 0.54
Ebf4Q8K4J2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ebf4Q8K4J2 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
Ebf4Q8K4J2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ebf4Q8K4J2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ebf4Q8K4J2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ebf4Q8K4J2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ebf4Q8K4J2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ebf4Q8K4J2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ebf4Q8K4J2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.43■□□□□ 0.54
Ebf4Q8K4J2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ebf4Q8K4J2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.43■□□□□ 0.54
Ebf4Q8K4J2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ebf4Q8K4J2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ebf4Q8K4J2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ebf4Q8K4J2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf4Q8K4J2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf4Q8K4J2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf4Q8K4J2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf4Q8K4J2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.42■□□□□ 0.54
Ebf4Q8K4J2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf4Q8K4J2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf4Q8K4J2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ebf4Q8K4J2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
Ebf4Q8K4J2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.42■□□□□ 0.54
Ebf4Q8K4J2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.41■□□□□ 0.54
Ebf4Q8K4J2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf4Q8K4J2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ebf4Q8K4J2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ebf4Q8K4J2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.41■□□□□ 0.54
Ebf4Q8K4J2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ebf4Q8K4J2 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.41■□□□□ 0.54
Ebf4Q8K4J2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.41■□□□□ 0.54
Ebf4Q8K4J2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.4■□□□□ 0.54
Ebf4Q8K4J2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ebf4Q8K4J2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ebf4Q8K4J2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ebf4Q8K4J2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.4■□□□□ 0.54
Ebf4Q8K4J2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ebf4Q8K4J2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ebf4Q8K4J2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ebf4Q8K4J2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ebf4Q8K4J2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.4■□□□□ 0.54
Ebf4Q8K4J2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ebf4Q8K4J2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ebf4Q8K4J2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Ebf4Q8K4J2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ebf4Q8K4J2 Gm7432-201ENSMUST00000210343 879 ntBASIC18.39■□□□□ 0.53
Ebf4Q8K4J2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ebf4Q8K4J2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ebf4Q8K4J2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ebf4Q8K4J2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ebf4Q8K4J2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf4Q8K4J2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf4Q8K4J2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf4Q8K4J2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ebf4Q8K4J2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.38■□□□□ 0.53
Ebf4Q8K4J2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf4Q8K4J2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf4Q8K4J2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf4Q8K4J2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf4Q8K4J2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf4Q8K4J2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf4Q8K4J2 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.38■□□□□ 0.53
Ebf4Q8K4J2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ebf4Q8K4J2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ebf4Q8K4J2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ebf4Q8K4J2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ebf4Q8K4J2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ebf4Q8K4J2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ebf4Q8K4J2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.37■□□□□ 0.53
Ebf4Q8K4J2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ebf4Q8K4J2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.36■□□□□ 0.53
Ebf4Q8K4J2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Ebf4Q8K4J2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ebf4Q8K4J2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ebf4Q8K4J2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ebf4Q8K4J2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ebf4Q8K4J2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.35■□□□□ 0.53
Ebf4Q8K4J2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf4Q8K4J2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf4Q8K4J2 Gm11599-201ENSMUST00000118720 878 ntBASIC18.35■□□□□ 0.53
Ebf4Q8K4J2 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.35■□□□□ 0.53
Ebf4Q8K4J2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf4Q8K4J2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf4Q8K4J2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf4Q8K4J2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf4Q8K4J2 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.35■□□□□ 0.53
Ebf4Q8K4J2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf4Q8K4J2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf4Q8K4J2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ebf4Q8K4J2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Ebf4Q8K4J2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ebf4Q8K4J2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf4Q8K4J2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf4Q8K4J2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ebf4Q8K4J2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf4Q8K4J2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf4Q8K4J2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms